RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-231	ENST00000566784	ZNF285	Q96NJ3	590 aa		13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	GPR21	Q99679	349 aa		13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	AARSD1	Q9BTE6	412 aa	Known RBP	13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	TXLNG	Q9NUQ3	528 aa		13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	TSR3	Q9UJK0	312 aa	Known RBP	13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	PADI2	Q9Y2J8	665 aa		13.3	□□□□□ -0.28
PKD1-231	ENST00000566784	ZNF839	A8K0R7	811 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	MKRN2OS	H3BPM6	223 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	GFY	I3L273	518 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784		J3QKU1	62 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	TTI1	O43156	1089 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	SUV39H1	O43463	412 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	SLC28A2	O43868	658 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	VPS26A	O75436	327 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	SEC31A	O94979	1220 aa	Known RBP	13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	CTSB	P07858	339 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	CD63	P08962	238 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	ERVK-10	P10266	1014 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	PSMB5	P28074	263 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	ARSF	P54793	590 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	DCD	P81605	110 aa	Known RBP	13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	CUL1	Q13616	776 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	FASTK	Q14296	549 aa	Known RBP	13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	LRRC8E	Q6NSJ5	796 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	UGT3A1	Q6NUS8	523 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	CYHR1	Q6ZMK1	362 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	IGDCC3	Q8IVU1	814 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	ASB11	Q8WXH4	323 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	SMPDL3A	Q92484	453 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	CERS2	Q96G23	380 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	SNF8	Q96H20	258 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	MIPEP	Q99797	713 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	TRIM51	Q9BSJ1	452 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	NDC1	Q9BTX1	674 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	IRAK4	Q9NWZ3	460 aa		13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	DHCR7	Q9UBM7	475 aa	Known RBP	13.29	□□□□□ -0.28
PKD1-231	ENST00000566784	TENM4	Q6N022	2769 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	NDC80	O14777	642 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	SRPX2	O60687	465 aa	Predicted RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	CTSV	O60911	334 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	KLF7	O75840	302 aa	Predicted RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	GABRB3	P28472	473 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	CMPK1	P30085	196 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ELK3	P41970	407 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	SKIV2L2	P42285	1042 aa	Known RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ITGA8	P53708	1063 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	PNLIPRP1	P54315	467 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ARL4C	P56559	192 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	NFKB2	Q00653	900 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	FRG1	Q14331	258 aa	Known RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	HIF1A	Q16665	826 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	LACTB2	Q53H82	288 aa	Predicted RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	STEAP4	Q687X5	459 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	TCTN3	Q6NUS6	607 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ATG14	Q6ZNE5	492 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	PRICKLE2	Q7Z3G6	844 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	PKP4	Q99569	1192 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	SELENOS	Q9BQE4	189 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	PLAC1	Q9HBJ0	212 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	TAS2R13	Q9NYV9	303 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ANKMY1	Q9P2S6	941 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	TRMT6	Q9UJA5	497 aa	Known RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	TEX264	Q9Y6I9	313 aa		13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	TNRC6A	Q8NDV7	1962 aa	Known RBP	13.28	□□□□□ -0.28
PKD1-231	ENST00000566784	MYO18B	Q8IUG5	2567 aa		13.27	□□□□□ -0.28
PKD1-231	ENST00000566784		A0A1B0GX78	115 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	OR2A25	A4D2G3	310 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	FITM1	A5D6W6	292 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	EFCAB8	A8MWE9	144 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784		E7ENX8	843 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TP73	O15350	636 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	ZBTB14	O43829	449 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CCNDBP1	O95273	360 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	SLC16A8	O95907	504 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	ONECUT2	O95948	504 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	AHSG	P02765	367 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	RPA3	P35244	121 aa	Predicted RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CARS	P49589	748 aa	Known RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	RGS4	P49798	205 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TAP2	Q03519	686 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CBLB	Q13191	982 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	GRM7	Q14831	915 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	NKAIN1	Q4KMZ8	207 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	C1orf189	Q5VU69	101 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	MRPL14	Q6P1L8	145 aa	Known RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	RNF44	Q7L0R7	432 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	RAB43	Q86YS6	212 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	CPNE9	Q8IYJ1	553 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TTC29	Q8NA56	475 aa	Predicted RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	ZNF480	Q8WV37	535 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	IP6K3	Q96PC2	410 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	KRT12	Q99456	494 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	WDR83	Q9BRX9	315 aa	Known RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	TRIM55	Q9BYV6	548 aa		13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	MRPS30	Q9NP92	439 aa	Known RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	IFT80	Q9P2H3	777 aa	Predicted RBP	13.27	□□□□□ -0.29
PKD1-231	ENST00000566784	GPN3	Q9UHW5	284 aa	Predicted RBP	13.27	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms