RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 SH2D5Q6ZV89 423 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 PLXDC1Q8IUK5 500 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 TCAIMQ8N3R3 496 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 PDPRQ8NCN5 879 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 SMPDL3AQ92484 453 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 FBXL8Q96CD0 374 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 MED8Q96G25 268 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 ZDHHC12Q96GR4 267 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 TGM7Q96PF1 710 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 DPYSL5Q9BPU6 564 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 MRPL57Q9BQC6 102 aaKnown RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 CCDC177Q9NQR7 707 aaPredicted RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 ABCF3Q9NUQ8 709 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 MKS1Q9NXB0 559 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 SPHK1Q9NYA1 384 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 TMEM216Q9P0N5 145 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 TMEM9Q9P0T7 183 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
KARS-207ENST00000566560 DCDC2Q9UHG0 476 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 POMT2Q9UKY4 750 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 ENTPD2Q9Y5L3 495 aa11.09□□□□□ -0.63
KARS-207ENST00000566560 A0A1W2PPV9 198 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TLCD2A6NGC4 264 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 ISM1B1AKI9 464 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 E7ENX8 843 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 RASSF9O75901 435 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SASH3O75995 380 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 C9P02748 559 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 THRAP10827 490 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 GFAPP14136 432 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 MPSTP25325 297 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PSMB5P28074 263 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 OAS2P29728 719 aaKnown RBP11.08□□□□□ -0.64
KARS-207ENST00000566560 CRHR1P34998 444 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 RPA3P35244 121 aaPredicted RBP11.08□□□□□ -0.64
KARS-207ENST00000566560 CCT5P48643 541 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 HNMTP50135 292 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PDX1P52945 283 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TAP2Q03519 686 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CFHR1Q03591 330 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SQSTM1Q13501 440 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 NAE1Q13564 534 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CDKL4Q5MAI5 379 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SNAP47Q5SQN1 464 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PHF19Q5T6S3 580 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 THEMIS2Q5TEJ8 643 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PRAMEF13Q5VWM6 474 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SULT1C3Q6IMI6 304 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TMEM71Q6P5X7 295 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SPESP1Q6UW49 350 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SUSD1Q6UWL2 747 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CDHR3Q6ZTQ4 885 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TMPRSS9Q7Z410 1059 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TRIM73Q86UV7 250 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 FBXO39Q8N4B4 442 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 GOLGA6L1Q8N7Z2 621 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 BANPQ8N9N5 519 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 OR4D9Q8NGE8 314 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 SLC22A18Q96BI1 424 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 ALKBH8Q96BT7 664 aaKnown RBP11.08□□□□□ -0.64
KARS-207ENST00000566560 RHBDF1Q96CC6 855 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CCDC74BQ96LY2 380 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CD180Q99467 661 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TMEM79Q9BSE2 394 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 RAB33BQ9H082 229 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 ATG10Q9H0Y0 220 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 ACBD3Q9H3P7 528 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TMBIM4Q9HC24 238 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 EPHA6Q9UF33 1036 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 TAC3Q9UHF0 121 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PTPRBP23467 1997 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 PCM1Q15154 2024 aa11.08□□□□□ -0.64
KARS-207ENST00000566560 CFAP54Q96N23 3096 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 AGPSO00116 658 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 SMIM24O75264 130 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 SPAG7O75391 227 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 IPO13O94829 963 aaKnown RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 CCNDBP1O95273 360 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 MTHFD2P13995 350 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CDH3P22223 829 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CCND1P24385 295 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 ID4P47928 161 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 KCNC1P48547 511 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 INHBCP55103 352 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 SLC5A12Q1EHB4 618 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 C18orf21Q32NC0 220 aaPredicted RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 FBXO48Q5FWF7 155 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 TNFAIP8L3Q5GJ75 292 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CDCP2Q5VXM1 449 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 CAPN13Q6MZZ7 669 aaPredicted RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 C16orf46Q6P387 395 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 PRSS42Q7Z5A4 293 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 B3GNT8Q7Z7M8 397 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 SLITRK4Q8IW52 837 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 LRRC56Q8IYG6 542 aaPredicted RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 PTGR2Q8N8N7 351 aaPredicted RBP11.07□□□□□ -0.64
KARS-207ENST00000566560 CCDC63Q8NA47 563 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 FLVCR1-AS1Q8TAF5 88 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 UBTD2Q8WUN7 234 aa11.07□□□□□ -0.64
KARS-207ENST00000566560 ADAMTS14Q8WXS8 1223 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms