RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 NFS1Q9Y697 457 aa12.79□□□□□ -0.36
HACD3-208ENST00000566239 RP1L1Q8IWN7 2480 aaPredicted RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 TCP11X1B4DZS4 312 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 E5RI56 91 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 CEP104O60308 925 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 ONECUT2O95948 504 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 CHRM3P20309 590 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 ITGAXP20702 1163 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 OGNP20774 298 aaKnown RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 ITGA3P26006 1051 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 ATP5DP30049 168 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 FMO4P31512 558 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 KCNJ1P48048 391 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 VSX2P58304 361 aaPredicted RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 NKG7Q16617 165 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 TYSND1Q2T9J0 566 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 PLEKHN1Q494U1 663 aaPredicted RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 PRR30Q53SZ7 412 aaPredicted RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 CTSL3PQ5NE16 218 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 CES3Q6UWW8 571 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 OR2L3Q8NG85 312 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 SSC4DQ8WTU2 575 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 LPGAT1Q92604 370 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 BIRC8Q96P09 236 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 ENAMQ9NRM1 1142 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 CUEDC1Q9NWM3 386 aaPredicted RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 RUVBL2Q9Y230 463 aaKnown RBP12.78□□□□□ -0.36
HACD3-208ENST00000566239 RELNP78509 3460 aa12.78□□□□□ -0.36
HACD3-208ENST00000566239 HYKKA2RU49 373 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 FITM1A5D6W6 292 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 NRDCO43847 1150 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 NIPSNAP2O75323 286 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 MATN4O95460 622 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 ERVK-10P10266 1014 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 MCM3P25205 808 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 ARNTP27540 789 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 PSMB5P28074 263 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 CMPK1P30085 196 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
HACD3-208ENST00000566239 FOXL2P58012 376 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 RBBP7Q16576 425 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 TUBB8Q3ZCM7 444 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 CCSMST1Q4G0I0 132 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 ANKRD20A4Q4UJ75 823 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 WASHC2DQ5SRD0 308 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 PRAMEF13Q5VWM6 474 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 KIAA0930Q6ICG6 404 aaPredicted RBP12.77□□□□□ -0.37
HACD3-208ENST00000566239 PRMT9Q6P2P2 845 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 CASC4Q6P4E1 433 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 OR2A1Q8NGT9 310 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 SNRNP40Q96DI7 357 aaKnown RBP12.77□□□□□ -0.37
HACD3-208ENST00000566239 ZNF285Q96NJ3 590 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 SPSB2Q99619 263 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 ZNF304Q9HCX3 659 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 SLC6A20Q9NP91 592 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 FAM114A2Q9NRY5 505 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 SEMA3GQ9NS98 782 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 TSR3Q9UJK0 312 aaKnown RBP12.77□□□□□ -0.37
HACD3-208ENST00000566239 FBXL4Q9UKA2 621 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 CRYL1Q9Y2S2 319 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 KLK4Q9Y5K2 254 aa12.77□□□□□ -0.37
HACD3-208ENST00000566239 PRRC2CQ9Y520 2896 aaKnown RBP12.77□□□□□ -0.37
HACD3-208ENST00000566239 USP9YO00507 2555 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 USP9XQ93008 2570 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 UTP20O75691 2785 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 A0A0J9YVX5 310 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 GOLGA8KD6RF30 607 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 GOLGA8TH3BQL2 631 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 CTSVO60911 334 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 PHF2O75151 1096 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 VPS26AO75436 327 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 CATP04040 527 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 CXCR5P32302 372 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 RPA3P35244 121 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 OR1D4P47884 311 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 CARSP49589 748 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 TERF1P54274 439 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 OCA2Q04671 838 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 GPS1Q13098 491 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 MRPL49Q13405 166 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 ELOAQ14241 798 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 KCNJ11Q14654 390 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 AGAP7PQ5VUJ5 663 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 COX15Q7KZN9 410 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 CISD2Q8N5K1 135 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 METTL27Q8N6F8 245 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 OR9A1PQ8NGU1 263 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 PRR7Q8TB68 274 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 SMPDL3AQ92484 453 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 AGAP4Q96P64 663 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 ZFYVE21Q9BQ24 234 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 DPH7Q9BTV6 452 aa12.76□□□□□ -0.37
HACD3-208ENST00000566239 SOX17Q9H6I2 414 aaPredicted RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 INTS10Q9NVR2 710 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 UTP6Q9NYH9 597 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 ZC3H7BQ9UGR2 993 aaKnown RBP12.76□□□□□ -0.37
HACD3-208ENST00000566239 HS3ST3B1Q9Y662 390 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms