RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 GOLGA8RI6L899 631 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KLK8O60259 260 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KERAO60938 352 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 SPAG7O75391 227 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 RFPL3O75679 317 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KCNK5O95279 499 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 SLC16A8O95907 504 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KRT16P08779 473 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 RBP1P09455 135 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 SBK3P0C264 359 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ALDH4A1P30038 563 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 PKLRP30613 574 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 GGT5P36269 586 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 BDKRB1P46663 353 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KCNJ2P63252 427 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 BIRC2Q13490 618 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 TGFBIQ15582 683 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 TBCCQ15814 346 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 CDCP2Q5VXM1 449 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ANKS6Q68DC2 871 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KLC3Q6P597 504 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 KLHL35Q6PF15 583 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 CDHR3Q6ZTQ4 885 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ZNF761Q86XN6 746 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-206ENST00000565990 GPSM1Q86YR5 675 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 CACTIN-AS1Q8N1I8 211 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ARHGAP24Q8N264 748 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ENDOVQ8N8Q3 282 aaKnown RBP12.21□□□□□ -0.45
SF3B3-206ENST00000565990 Q8N9G6 341 aaPredicted RBP12.21□□□□□ -0.45
SF3B3-206ENST00000565990 LINC01555Q8NAE3 123 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 OR10G6Q8NH81 332 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 FLVCR1-AS1Q8TAF5 88 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ZNF480Q8WV37 535 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 FBXL8Q96CD0 374 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ERP27Q96DN0 273 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 MRPL57Q9BQC6 102 aaKnown RBP12.21□□□□□ -0.45
SF3B3-206ENST00000565990 RAB11FIP5Q9BXF6 653 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 MYLK2Q9H1R3 596 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ALG9Q9H6U8 611 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 HRASLS2Q9NWW9 162 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 TMEM216Q9P0N5 145 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 TSR3Q9UJK0 312 aaKnown RBP12.21□□□□□ -0.45
SF3B3-206ENST00000565990 ENTPD2Q9Y5L3 495 aa12.21□□□□□ -0.45
SF3B3-206ENST00000565990 PTPRBP23467 1997 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 NPEPPSL1A6NEC2 478 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 SYCE1LA8MT33 242 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 E7ENX8 843 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 GIPC1O14908 333 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 CASC3O15234 703 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 BIRC5O15392 142 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 KIF1CO43896 1103 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 CPNE6O95741 557 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PROS1P07225 676 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ANXA5P08758 320 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 IMPA1P29218 277 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 GCKP35557 465 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ETV4P43268 484 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 HNMTP50135 292 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PNLIPRP1P54315 467 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 TAP2Q03519 686 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ZFP36L1Q07352 338 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 TECRLQ5HYJ1 363 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ATG16L1Q676U5 607 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ZNF574Q6ZN55 896 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 KLHDC8AQ8IYD2 350 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 RAB42Q8N4Z0 105 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PDPRQ8NCN5 879 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 RHBDF1Q96CC6 855 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 C7orf26Q96N11 449 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 DPYSL5Q9BPU6 564 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PAIP2Q9BPZ3 127 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 UNKQ9C0B0 810 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 MRPL46Q9H2W6 279 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 XKR8Q9H6D3 395 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 MANSC1Q9H8J5 431 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PCMTD2Q9NV79 361 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ARL15Q9NXU5 204 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 SEMA5BQ9P283 1151 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 STOX2Q9P2F5 926 aaPredicted RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 ZFP69BQ9UJL9 534 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 PTBP2Q9UKA9 531 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 GRID1Q9ULK0 1009 aa12.2□□□□□ -0.46
SF3B3-206ENST00000565990 SNRNP200O75643 2136 aaKnown RBP12.2□□□□□ -0.46
SF3B3-206ENST00000565990 HEATR5BQ9P2D3 2071 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 SPAARA0A1B0GVQ0 90 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 A0A1W2PPV9 198 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 KRT87PA6NCN2 255 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 OR6C74A6NCV1 312 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 ZNF839A8K0R7 811 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 MATN2O00339 956 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 TAPBPO15533 448 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 CCDC22O60826 627 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 GLRA3O75311 464 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 TOP3BO95985 862 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 C9P02748 559 aa12.19□□□□□ -0.46
SF3B3-206ENST00000565990 RPLP0P05388 317 aaKnown RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 CHRM5P08912 532 aaPredicted RBP12.19□□□□□ -0.46
SF3B3-206ENST00000565990 HOXB3P14651 431 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms