RNA–Protein interactions for RNA: ENST00000565803.1

CHD9-216, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 3,625 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-216ENST00000565803 ALG12Q9BV10 488 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SF3B5Q9BWJ5 86 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 TP63Q9H3D4 680 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 GAL3ST2Q9H3Q3 398 aa3□□□□□ -1.93
CHD9-216ENST00000565803 ZNF768Q9H5H4 540 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 SPATA6Q9NWH7 488 aaPredicted RBP3□□□□□ -1.93
CHD9-216ENST00000565803 MTMR4Q9NYA4 1195 aa3□□□□□ -1.93
CHD9-216ENST00000565803 SMARCAL1Q9NZC9 954 aa3□□□□□ -1.93
CHD9-216ENST00000565803 PRSS50Q9UI38 385 aa3□□□□□ -1.93
CHD9-216ENST00000565803 DBNLQ9UJU6 430 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 RUVBL2Q9Y230 463 aaKnown RBP3□□□□□ -1.93
CHD9-216ENST00000565803 MFHAS1Q9Y4C4 1052 aa3□□□□□ -1.93
CHD9-216ENST00000565803 LIPGQ9Y5X9 500 aa3□□□□□ -1.93
CHD9-216ENST00000565803 HTTP42858 3142 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 A0A1B0GWJ7 208 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CD8B2A6NJW9 211 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ZNF839A8K0R7 811 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 BECN2A8MW95 431 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 RNF225M0QZC1 329 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 MAN2B1O00754 1011 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 EIF3HO15372 352 aaKnown RBP eCLIP2.99□□□□□ -1.931e-7■■■■■ 27.4
CHD9-216ENST00000565803 LIASO43766 372 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ENSAO43768 121 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 CLN5O75503 358 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SPAG6O75602 509 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 PRSS23O95084 383 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 OR6A2O95222 327 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ABHD16AO95870 558 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 AMY2AP04746 511 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 LINGO3P0C6S8 592 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CETPP11597 493 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 NQO2P16083 231 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SELPP16109 830 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 GABRB1P18505 474 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 AMY2BP19961 511 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ACVR2AP27037 513 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CD79BP40259 229 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SLC1A3P43003 542 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ARHGDIAP52565 204 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 NUP107P57740 925 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 VSNL1P62760 191 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 MSLNQ13421 630 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 TUBB3Q13509 450 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 GRAPQ13588 217 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 RAB39AQ14964 217 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 GPR19Q15760 415 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SMN1Q16637 294 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 ZXDCQ2QGD7 858 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 AARS2Q5JTZ9 985 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 ZNF618Q5T7W0 954 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 GPR157Q5UAW9 335 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 METTL2BQ6P1Q9 378 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 IL20RBQ6UXL0 311 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 RSPO2Q6UXX9 243 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 RBM45Q8IUH3 476 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 C11orf44Q8N8P7 122 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 L3MBTL4Q8NA19 623 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 TSEN15Q8WW01 171 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 CFHR4Q92496 578 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ARRDC3Q96B67 414 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 S100PBPQ96BU1 408 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 PANX3Q96QZ0 392 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 TSC22D3Q99576 134 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 RBBP8Q99708 897 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 PSD2Q9BQI7 771 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 MED10Q9BTT4 135 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 PHF7Q9BWX1 381 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 C1QTNF3Q9BXJ4 246 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SMG9Q9H0W8 520 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 WNT8AQ9H1J5 351 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 MANSC1Q9H8J5 431 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ABCB9Q9NP78 766 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 DMAP1Q9NPF5 467 aaPredicted RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 DYRK4Q9NR20 520 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CHST7Q9NS84 486 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 POT1Q9NUX5 634 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 VPS54Q9P1Q0 977 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 GMPR2Q9P2T1 348 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 TRMT6Q9UJA5 497 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 PADI1Q9ULC6 663 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 SNX7Q9UNH6 387 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CDY2AQ9Y6F7 541 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 NPIPA5A0A0B4J1W7 369 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 A0A1W2PQ27 194 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 A0A1W2PQ64 194 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 A0A1W2PQC6 194 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 A0A1W2PQD8 194 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CGB1A6NKQ9 187 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 NPIPA5E9PKD4 350 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 NPIPA3F8WFD2 350 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ZNF213O14771 459 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 LDLRAD4O15165 306 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 ADAMDEC1O15204 470 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 OR2C1O95371 312 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 LYPLA2O95372 231 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CFIP05156 583 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 CYP2C8P10632 490 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 HSPD1P10809 573 aaKnown RBP2.99□□□□□ -1.93
CHD9-216ENST00000565803 HGFP14210 728 aa2.99□□□□□ -1.93
CHD9-216ENST00000565803 AGAP20933 346 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms