RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 SERPINB12Q96P63 405 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 SLC26A1Q9H2B4 701 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 WDR54Q9H977 334 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 P4HTMQ9NXG6 502 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 FAM169AQ9Y6X4 670 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 CCDC88CQ9P219 2028 aa19.05■□□□□ 0.64
CLN6-206ENST00000565471 A0A1W2PPV9 198 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 KRT87PA6NCN2 255 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 E5RI56 91 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 PGRMC1O00264 195 aaKnown RBP19.04■□□□□ 0.64
CLN6-206ENST00000565471 KLHL41O60662 606 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 CTSVO60911 334 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 PSIP1O75475 530 aaKnown RBP19.04■□□□□ 0.64
CLN6-206ENST00000565471 MAGEA3P43357 314 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 FAM214AQ32MH5 1076 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 ZNF470Q6ECI4 717 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 JMJD6Q6NYC1 403 aaPredicted RBP19.04■□□□□ 0.64
CLN6-206ENST00000565471 NEK10Q6ZWH5 1172 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 OVCH1Q7RTY7 1134 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 PPP1R32Q7Z5V6 425 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 OR9A1PQ8NGU1 263 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 FAM136AQ96C01 138 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 MIPEPQ99797 713 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 TRIM56Q9BRZ2 755 aaKnown RBP19.04■□□□□ 0.64
CLN6-206ENST00000565471 FAM114A2Q9NRY5 505 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 IL1RAPL1Q9NZN1 696 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 KLHL42Q9P2K6 505 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 GALPQ9UBC7 116 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 ANKRD12Q6UB98 2062 aa19.04■□□□□ 0.64
CLN6-206ENST00000565471 ZCWPW2A0A1B0GU75 182 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 ARHGEF33A8MVX0 844 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 MYO1CO00159 1063 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 USP1O94782 785 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 ATXN8OSP0DMR3 200 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 MCM3P25205 808 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 CLCN7P51798 805 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 SOX8P57073 446 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 THOC5Q13769 683 aaKnown RBP19.03■□□□□ 0.64
CLN6-206ENST00000565471 MYBPC3Q14896 1274 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 ARHGAP19Q14CB8 494 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 KLHL38Q2WGJ6 581 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 ACSBG2Q5FVE4 666 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.03■□□□□ 0.64
CLN6-206ENST00000565471 RNF44Q7L0R7 432 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 LMNTD2Q8IXW0 634 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 GALNT16Q8N428 558 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 FAM26EQ8N5C1 309 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 GALNT11Q8NCW6 608 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 PNPLA2Q96AD5 504 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 ANKMY1Q9P2S6 941 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 TSR3Q9UJK0 312 aaKnown RBP19.03■□□□□ 0.64
CLN6-206ENST00000565471 NXT1Q9UKK6 140 aaKnown RBP19.03■□□□□ 0.64
CLN6-206ENST00000565471 MAP4K5Q9Y4K4 846 aa19.03■□□□□ 0.64
CLN6-206ENST00000565471 PCM1Q15154 2024 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 HECTD1Q9ULT8 2610 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 OR2A25A4D2G3 310 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 CTAGE9A4FU28 777 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 PHF2O75151 1096 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 VPS4BO75351 444 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 CATP04040 527 aaKnown RBP19.02■□□□□ 0.64
CLN6-206ENST00000565471 ALPPP05187 535 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 MMP11P24347 488 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 CMPK1P30085 196 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 HSD17B2P37059 387 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 FNTAP49354 379 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 FOXL2P58012 376 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 VSX2P58304 361 aaPredicted RBP19.02■□□□□ 0.64
CLN6-206ENST00000565471 FASTKQ14296 549 aaKnown RBP19.02■□□□□ 0.64
CLN6-206ENST00000565471 NKG7Q16617 165 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 TTLL9Q3SXZ7 439 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 WASHC2DQ5SRD0 308 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 SLC6A19Q695T7 634 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 COX15Q7KZN9 410 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 RBMXL3Q8N7X1 1067 aaKnown RBP19.02■□□□□ 0.64
CLN6-206ENST00000565471 NAT8LQ8N9F0 302 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 ACTRT1Q8TDG2 376 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 GRK7Q8WTQ7 553 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 SMPDL3AQ92484 453 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 KCNJ9Q92806 393 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 SPSB2Q99619 263 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 VPS4AQ9UN37 437 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 NUP210LQ5VU65 1888 aa19.02■□□□□ 0.64
CLN6-206ENST00000565471 PTPN13Q12923 2485 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 A0A0J9YVX5 310 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 HYKKA2RU49 373 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 GOLGA8MH3BSY2 632 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 AGPSO00116 658 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 VARSP26640 1264 aaKnown RBP19.01■□□□□ 0.63
CLN6-206ENST00000565471 SRSF1Q07955 248 aaKnown RBP eCLIP19.01■□□□□ 0.63
CLN6-206ENST00000565471 RAPSNQ13702 412 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 FRMPD2BQ6IN97 320 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 DENND6AQ8IWF6 608 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 Q8NA96 180 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 FBXO15Q8NCQ5 510 aaPredicted RBP19.01■□□□□ 0.63
CLN6-206ENST00000565471 CALML6Q8TD86 181 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 COG1Q8WTW3 980 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 OSBPL9Q96SU4 736 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 ZFYVE21Q9BQ24 234 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 DPH7Q9BTV6 452 aa19.01■□□□□ 0.63
CLN6-206ENST00000565471 CCDC68Q9H2F9 335 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms