RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 DNAAF2Q9NVR5 837 aaKnown RBP10.75□□□□□ -0.69
SF3B3-205ENST00000564899 TOR4AQ9NXH8 423 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 OPTCQ9UBM4 332 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 POLG2Q9UHN1 485 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 ANGPTL3Q9Y5C1 460 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 COLEC10Q9Y6Z7 277 aa10.75□□□□□ -0.69
SF3B3-205ENST00000564899 LRP4O75096 1905 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PTPRQQ9UMZ3 2332 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 TRBV23OR9-2A0A075B6M9 112 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 KIR2DS5A0A0G2JLQ3 304 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 A0A0G2JNG1 304 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 OR5K4A6NMS3 321 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 KIR2DS3K7RE56 304 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 E2F3O00716 465 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 KDM1AO60341 852 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 WDR47O94967 919 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SNUPNO95149 360 aaKnown RBP10.74□□□□□ -0.69
SF3B3-205ENST00000564899 MLYCDO95822 493 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 CHRNGP07510 517 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 ANXA6P08133 673 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 TSPAN8P19075 237 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 DRD4P21917 467 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 MPSTP25325 297 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 GGT5P36269 586 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 HSD17B2P37059 387 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SLC19A1P41440 591 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 GDF5P43026 501 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PIK3CGP48736 1102 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PNLIPRP1P54315 467 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 LCP2Q13094 533 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 NAE1Q13564 534 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 GTF2H2Q13888 395 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 KIR2DS5Q14953 304 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 RBBP7Q16576 425 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PTCHD3Q3KNS1 767 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 GTF2H2CQ6P1K8 395 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 IYDQ6PHW0 289 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 ATG14Q6ZNE5 492 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 CUZD1Q86UP6 607 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 LSMEM2Q8N112 164 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SDR16C5Q8N3Y7 309 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SNX31Q8N9S9 440 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 OR52E1Q8NGJ3 308 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 TRPC4APQ8TEL6 797 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 ZDHHC1Q8WTX9 485 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PYCR2Q96C36 320 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 MED8Q96G25 268 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 IL17FQ96PD4 163 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SORT1Q99523 831 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 RAB11FIP5Q9BXF6 653 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SHCBP1LQ9BZQ2 653 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 KIR3DX1Q9H7L2 352 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 SEMA4BQ9NPR2 832 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-205ENST00000564899 POT1Q9NUX5 634 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PSD3Q9NYI0 1048 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF624Q9P2J8 865 aaPredicted RBP10.74□□□□□ -0.69
SF3B3-205ENST00000564899 LNPEPQ9UIQ6 1025 aa10.74□□□□□ -0.69
SF3B3-205ENST00000564899 PRAMEF33A0A0G2JMD5 474 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 FAM149AA5PLN7 773 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF839A8K0R7 811 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 LMO7DNF2Z398 122 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 YY2O15391 372 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 VIPP01282 170 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 EPB42P16452 691 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 PKLRP30613 574 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 RXRGP48443 463 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 TBPL1P62380 186 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 UBE2IP63279 158 aaKnown RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 GALNT1Q10472 559 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 PRKAA1Q13131 559 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 TSTA3Q13630 321 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 FASTKQ14296 549 aaKnown RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ARHGAP19Q14CB8 494 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 CYP2A13Q16696 494 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ZXDCQ2QGD7 858 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 DEFB133Q30KQ1 61 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 CAPN13Q6MZZ7 669 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 CPLX4Q7Z7G2 160 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 SLC9B2Q86UD5 537 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 THOC6Q86W42 341 aaKnown RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 KLHDC8AQ8IYD2 350 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 NAGSQ8N159 534 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 SFRP1Q8N474 314 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ZNF781Q8N8C0 355 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 LMNTD1Q8N9Z9 388 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 PPFIBP2Q8ND30 876 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 OR56A3Q8NH54 315 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 AGR3Q8TD06 166 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 MAPK15Q8TD08 544 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 SLC37A2Q8TED4 501 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 PATE1Q8WXA2 126 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 MENTQ9BUN1 341 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ILKAPQ9H0C8 392 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 NOL11Q9H8H0 719 aaKnown RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ZBTB26Q9HCK0 441 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 MID1IP1Q9NPA3 183 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 CCDC177Q9NQR7 707 aaPredicted RBP10.73□□□□□ -0.69
SF3B3-205ENST00000564899 ABCF3Q9NUQ8 709 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 DNAJC11Q9NVH1 559 aa10.73□□□□□ -0.69
SF3B3-205ENST00000564899 UCKL1Q9NWZ5 548 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms