RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 PEBP1P30086 187 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 PCBP4P57723 403 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 NAE1Q13564 534 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 TSNQ15631 228 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 ZC3H12BQ5HYM0 836 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 CAPN13Q6MZZ7 669 aaPredicted RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 KLC3Q6P597 504 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 FIGLAQ6QHK4 219 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 ADGRD1Q6QNK2 874 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 CLEC14AQ86T13 490 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 GPSM1Q86YR5 675 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 C19orf47Q8N9M1 422 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 PPFIBP2Q8ND30 876 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 OR2A1Q8NGT9 310 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 OR8K5Q8NH50 307 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 STAG3L4Q8TBR4 150 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 DCAKDQ8WVC6 231 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 MTBPQ96DY7 904 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 TSNARE1Q96NA8 513 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 FCRL4Q96PJ5 515 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 ATG10Q9H0Y0 220 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 PPCSQ9HAB8 311 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 MRPS30Q9NP92 439 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 CCDC177Q9NQR7 707 aaPredicted RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 WDR70Q9NW82 654 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 SIDT1Q9NXL6 827 aaKnown RBP15.4■□□□□ 0.06
RAB40C-208ENST00000564703 FETUBQ9UGM5 382 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 B3GALT1Q9Y5Z6 326 aa15.4■□□□□ 0.06
RAB40C-208ENST00000564703 C9orf172C9J069 976 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 TRIM49D1C9J1S8 452 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 SLC35E2BP0CK96 405 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 CD1DP15813 335 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 MAGP20916 626 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 HNMTP50135 292 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 ABATP80404 500 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 CDKL1Q00532 357 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 PRDX1Q06830 199 aaKnown RBP15.39■□□□□ 0.05
RAB40C-208ENST00000564703 GPR19Q15760 415 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 SBSNQ6UWP8 590 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 LRRC69Q6ZNQ3 347 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 FAM20CQ8IXL6 584 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 GPR135Q8IZ08 494 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 KDF1Q8NAX2 398 aaPredicted RBP15.39■□□□□ 0.05
RAB40C-208ENST00000564703 ZNF248Q8NDW4 579 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 OR2L3Q8NG85 312 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 FLVCR1-AS1Q8TAF5 88 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 KIAA1191Q96A73 305 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 FBXL8Q96CD0 374 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 CNTNAP3BQ96NU0 1288 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 CNTNAP3Q9BZ76 1288 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 UNKQ9C0B0 810 aaKnown RBP15.39■□□□□ 0.05
RAB40C-208ENST00000564703 SLC7A5P2Q9GIP4 190 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 TWSG1Q9GZX9 223 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 CHRNA10Q9GZZ6 450 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 APMAPQ9HDC9 416 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 IRAK4Q9NWZ3 460 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 TAC3Q9UHF0 121 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 RNF112Q9ULX5 631 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 SNX7Q9UNH6 387 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 OARD1Q9Y530 152 aa15.39■□□□□ 0.05
RAB40C-208ENST00000564703 A0A1W2PPV9 198 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 HMX2A2RU54 273 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 TMEM150CB9EJG8 249 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 WISP3O95389 354 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-208ENST00000564703 FGF5P12034 268 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 TFEBP19484 476 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 HRH2P25021 359 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 PSMB5P28074 263 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 GRIA3P42263 894 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.38■□□□□ 0.05
RAB40C-208ENST00000564703 KIAA1614Q5VZ46 1190 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 ICE2Q659A1 982 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 MBOAT1Q6ZNC8 495 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 NXNL1Q96CM4 212 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 CABS1Q96KC9 395 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 HAUS8Q9BT25 410 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 DPH7Q9BTV6 452 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 CD274Q9NZQ7 290 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 PSMC3IPQ9P2W1 217 aaPredicted RBP15.38■□□□□ 0.05
RAB40C-208ENST00000564703 IKZF3Q9UKT9 509 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 PLCL2Q9UPR0 1127 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 KLHL20Q9Y2M5 609 aa15.38■□□□□ 0.05
RAB40C-208ENST00000564703 URB1O60287 2271 aaKnown RBP15.37■□□□□ 0.05
RAB40C-208ENST00000564703 CCDC189A1A4V9 331 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 SYCE1LA8MT33 242 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 STMND1H3BQB6 276 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 KLHL2O95198 593 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 ALDOAP04075 364 aaKnown RBP15.37■□□□□ 0.05
RAB40C-208ENST00000564703 CAPNS1P04632 268 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 MSL3P1P0C860 447 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 COL6A2P12110 1019 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 HSD17B3P37058 310 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 IFFO1Q0D2I5 559 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 ACAP2Q15057 778 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 TGFBIQ15582 683 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 CDKL4Q5MAI5 379 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 PRAMEF13Q5VWM6 474 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 CDHR3Q6ZTQ4 885 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 ADCK2Q7Z695 626 aa15.37■□□□□ 0.05
RAB40C-208ENST00000564703 C17orf64Q86WR6 236 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms