RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 TFPTP0C1Z6 253 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 PRDX6P30041 224 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 ACSL1P33121 698 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 ALDH3B2P48448 385 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 IDH3AP50213 366 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 PPP2CBP62714 309 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 PPP2CAP67775 309 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 CHRNEQ04844 493 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 CLCQ05315 142 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 SF3B4Q15427 424 aaKnown RBP eCLIP17.22■□□□□ 0.35
GDE1-203ENST00000564172 SYNPOQ8N3V7 929 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 SLC12A9Q9BXP2 914 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 ZNF304Q9HCX3 659 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 POLMQ9NP87 494 aaPredicted RBP17.22■□□□□ 0.35
GDE1-203ENST00000564172 DNAJC28Q9NX36 388 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 WNT16Q9UBV4 365 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 PTBP2Q9UKA9 531 aaKnown RBP17.22■□□□□ 0.35
GDE1-203ENST00000564172 ASB1Q9Y576 335 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 OR1A2Q9Y585 309 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 TRIOO75962 3097 aa17.22■□□□□ 0.35
GDE1-203ENST00000564172 TMEM233B4DJY2 109 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 CHURC1-FNTBB4DL54 471 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 SLCO1B7G3V0H7 640 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 GFYI3L273 518 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 CRYZL1O95825 349 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 C8GP07360 202 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PBLDP30039 288 aaPredicted RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 DGKEP52429 567 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 SYTL3Q4VX76 610 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 HABP4Q5JVS0 413 aaKnown RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 EPGNQ6UW88 154 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 USP43Q70EL4 1123 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 UBE2R2Q712K3 238 aaPredicted RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 SYT13Q7L8C5 426 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 ALYREFQ86V81 257 aaKnown RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 GLMNQ92990 594 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 RILPQ96NA2 401 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 C1QTNF7Q9BXJ2 289 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 WDR26Q9H7D7 661 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 ZBTB26Q9HCK0 441 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 ITM2CQ9NQX7 267 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 VTI1BQ9UEU0 232 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 EBF1Q9UH73 591 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PCTPQ9UKL6 214 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PDE10AQ9Y233 779 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PCYT1BQ9Y5K3 369 aaPredicted RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 SLC31A1O15431 190 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 POP7O75817 140 aaKnown RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 ZBTB11O95625 1053 aaPredicted RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 KRT6AP02538 564 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 KRT6BP04259 564 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 INHBBP09529 407 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PREPP48147 710 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 RPIAP49247 311 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 SH3BP2P78314 561 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 FZD5Q13467 585 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 GAS6Q14393 721 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 PCBP2Q15366 365 aaKnown RBP eCLIP17.21■□□□□ 0.354e-9■■■■■ 37.7
GDE1-203ENST00000564172 C18orf21Q32NC0 220 aaPredicted RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 TMEM31Q5JXX7 168 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 NANOGP8Q6NSW7 305 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 DOK6Q6PKX4 331 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 C11orf96Q7Z7L8 435 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 EGFL8Q99944 293 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 B3GNT4Q9C0J1 378 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 BTBD1Q9H0C5 482 aa17.21■□□□□ 0.35
GDE1-203ENST00000564172 MRPS17Q9Y2R5 130 aaKnown RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 TNPO3Q9Y5L0 923 aaKnown RBP17.21■□□□□ 0.35
GDE1-203ENST00000564172 C17orf113A0A1B0GUU1 675 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 E2F3O00716 465 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 TXNDC9O14530 226 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 TAPBPO15533 448 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 FKBP9O95302 570 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 MATN4O95460 622 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 STARD6P59095 220 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 TUBB3Q13509 450 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 LRRC32Q14392 662 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 TLR1Q15399 786 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 NXNQ6DKJ4 435 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 CRTC3Q6UUV7 619 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 LPCAT2Q7L5N7 544 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 RASGRP3Q8IV61 690 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 CFAP206Q8IYR0 622 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 ASB12Q8WXK4 309 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 JADE3Q92613 823 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 RHBDF1Q96CC6 855 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 LTB4R2Q9NPC1 389 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 FZD3Q9NPG1 666 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SEMA4BQ9NPR2 832 aaPredicted RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 C2orf42Q9NWW7 574 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 EIF2B4Q9UI10 523 aaKnown RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 FBXL21Q9UKT6 434 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 APOBEC2Q9Y235 224 aaKnown RBP17.2■□□□□ 0.34
GDE1-203ENST00000564172 TRAF6Q9Y4K3 522 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 HAT1O14929 419 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 SLC16A5O15375 505 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 C8BP07358 591 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 PDHA2P29803 388 aa17.2■□□□□ 0.34
GDE1-203ENST00000564172 IGFALSP35858 605 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms