RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 RPA3P35244 121 aaPredicted RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PNLIPRP1P54315 467 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 SP140Q13342 867 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PDAP1Q13442 181 aaKnown RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 TCTE1Q5JU00 501 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PRAMEF17Q5VTA0 474 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 FAM45BPQ6NSW5 357 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 RHBDD2Q6NTF9 364 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 FAM199XQ6PEV8 388 aaPredicted RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 TRMT10BQ6PF06 316 aaKnown RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 UBE2R2Q712K3 238 aaPredicted RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 FAM20CQ8IXL6 584 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 OR2A1Q8NGT9 310 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 FAM45AQ8TCE6 357 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PYROXD1Q8WU10 500 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 WDR83Q9BRX9 315 aaKnown RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 NDC1Q9BTX1 674 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 NLNQ9BYT8 704 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PHACTR1Q9C0D0 580 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 CHST8Q9H2A9 424 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PLAC1Q9HBJ0 212 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 ANKMY1Q9P2S6 941 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 CDC23Q9UJX2 597 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 POLHQ9Y253 713 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 FARSAQ9Y285 508 aaKnown RBP19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PADI2Q9Y2J8 665 aa19.09■□□□□ 0.65
CMTM3-207ENST00000564060 PABPN1LA6NDY0 278 aaKnown RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 SYF2O95926 243 aaKnown RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 TUBB4AP04350 444 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 CD63P08962 238 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 GABRB3P28472 473 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 ARSFP54793 590 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 ERV3-1Q14264 604 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 RBM20Q5T481 1227 aaKnown RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 YOD1Q5VVQ6 348 aaPredicted RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 DUPD1Q68J44 220 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 SLC26A11Q86WA9 606 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 GPATCH11Q8N954 259 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 MCOLN3Q8TDD5 553 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 APOBEC4Q8WW27 367 aaKnown RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 PKP4Q99569 1192 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 MIPEPQ99797 713 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 AKIRIN1Q9H9L7 192 aaPredicted RBP19.08■□□□□ 0.64
CMTM3-207ENST00000564060 TUBD1Q9UJT1 453 aa19.08■□□□□ 0.64
CMTM3-207ENST00000564060 A0A1W2PPV9 198 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 KRT87PA6NCN2 255 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 H3BMH7 237 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SLC16A5O15375 505 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SRPX2O60687 465 aaPredicted RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SLC16A8O95907 504 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 PRB1P04280 392 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 PSMB5P28074 263 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 GRIA3P42263 894 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 POLE2P56282 527 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 MRPS25P82663 173 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 TSTA3Q13630 321 aaPredicted RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 FASTKQ14296 549 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 FASTKD3Q14CZ7 662 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 DEFB109BQ30KR1 87 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 FCRL6Q6DN72 434 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 CYHR1Q6ZMK1 362 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 PIWIL4Q7Z3Z4 852 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 MCATQ8IVS2 390 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 ZNF655Q8N720 491 aaPredicted RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 CDKL2Q92772 493 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SELENOSQ9BQE4 189 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 DHRS4Q9BTZ2 278 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SPRTNQ9H040 489 aaPredicted RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 MRPS30Q9NP92 439 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 GEMIN8Q9NWZ8 242 aaKnown RBP19.07■□□□□ 0.64
CMTM3-207ENST00000564060 MOCS1Q9NZB8 636 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 SNX7Q9UNH6 387 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 KLHL20Q9Y2M5 609 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 VWA7Q9Y334 891 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 CCDC88CQ9P219 2028 aa19.07■□□□□ 0.64
CMTM3-207ENST00000564060 CDC14CA4D256 554 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 KIF2AO00139 706 aaPredicted RBP19.06■□□□□ 0.64
CMTM3-207ENST00000564060 HCRTR1O43613 425 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 URI1O94763 535 aaPredicted RBP19.06■□□□□ 0.64
CMTM3-207ENST00000564060 FAM87AP0C7U9 286 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 IL2P60568 153 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 DCDP81605 110 aaKnown RBP19.06■□□□□ 0.64
CMTM3-207ENST00000564060 GRM7Q14831 915 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 UGT8Q16880 541 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 WHAMMP3Q1A5X7 153 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 PTCHD3Q3KNS1 767 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 HECTD2Q5U5R9 776 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 PAQR3Q6TCH7 311 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 FAM198BQ6UWH4 519 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 ENDOVQ8N8Q3 282 aaKnown RBP19.06■□□□□ 0.64
CMTM3-207ENST00000564060 EXD3Q8N9H8 876 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 TTC29Q8NA56 475 aaPredicted RBP19.06■□□□□ 0.64
CMTM3-207ENST00000564060 ZNF480Q8WV37 535 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 EEF1AKMT1Q8WVE0 214 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 THAP4Q8WY91 577 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 LINGO1Q96FE5 620 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 CCDC138Q96M89 665 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 ACAT2Q9BWD1 397 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 SAYSD1Q9NPB0 183 aa19.06■□□□□ 0.64
CMTM3-207ENST00000564060 GRHL1Q9NZI5 618 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms