RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 EFTUD2Q15029 972 aaKnown RBP eCLIP2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 MTHFSDQ2M296 383 aaKnown RBP2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 UGT3A2Q3SY77 523 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 CES4AQ5XG92 561 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 FRRS1Q6ZNA5 592 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 ARHGAP22Q7Z5H3 698 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 SLC47A2Q86VL8 602 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 HPS6Q86YV9 775 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 ZNF595Q8IYB9 648 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 C17orf53Q8N3J3 647 aaPredicted RBP2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 GUF1Q8N442 669 aaKnown RBP2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 POC5Q8NA72 575 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 EXD1Q8NHP7 514 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 LRRC15Q8TF66 581 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 PIGBQ92521 554 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 LPGAT1Q92604 370 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 SPDL1Q96EA4 605 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 ZNF414Q96IQ9 312 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 CHCHD6Q9BRQ6 235 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 PUS3Q9BZE2 481 aaKnown RBP2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 EQTNQ9NQ60 294 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 TMED3Q9Y3Q3 217 aa2.67□□□□□ -1.98
HMGB1P33-201ENST00000563485 HCFC1P51610 2035 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 ACOD1A6NK06 481 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 GJB3O75712 270 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 BAIAP3O94812 1187 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 HPRP00739 348 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 ITIH1P19827 911 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 CREB5Q02930 508 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 EXT1Q16394 746 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 C11orf63Q6NUN7 778 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 ZNF584Q8IVC4 421 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 C11orf53Q8IXP5 236 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 MMD2Q8IY49 270 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 CHPT1Q8WUD6 406 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 SYN2Q92777 582 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 SLC45A3Q96JT2 553 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 SPAG5Q96R06 1193 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 RPP25Q9BUL9 199 aaKnown RBP2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 FAM49AQ9H0Q0 323 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 WNT5BQ9H1J7 359 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 OPA3Q9H6K4 179 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 GNB4Q9HAV0 340 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 DPP3Q9NY33 737 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 GPR83Q9NYM4 423 aa2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 C19orf25Q9UFG5 118 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P33-201ENST00000563485 ZNF646O15015 1829 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P33-201ENST00000563485 SNURFLB1AK76 121 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZBED4O75132 1171 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 THEGLP0DJG4 465 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 CAPN3P20807 821 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 MPZP25189 248 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 HNRNPKP61978 463 aaKnown RBP eCLIP2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 PSMC6P62333 389 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 PCLAFQ15004 111 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 LEKR1Q6ZMV7 388 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 GDPGP1Q6ZNW5 385 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 C1orf122Q6ZSJ8 110 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 LINC00346Q8IVM7 164 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 ABHD12Q8N2K0 398 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 THAP8Q8NA92 274 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 SLC37A3Q8NCC5 494 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 MCUQ8NE86 351 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZPLD1Q8TCW7 415 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 THOC1Q96FV9 657 aaKnown RBP2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 ATXN7L3BQ96GX2 97 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 SFXN2Q96NB2 322 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 CCDC3Q9BQI4 270 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 TDRD1Q9BXT4 1180 aaKnown RBP2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 TRPV4Q9HBA0 871 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 SLC35C2Q9NQQ7 365 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF510Q9Y2H8 683 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 PADI2Q9Y2J8 665 aa2.65□□□□□ -1.99
HMGB1P33-201ENST00000563485 MYH14Q7Z406 1995 aaKnown RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 LOC105371242A0A075B767 164 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 A6NCN8 305 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 ARPC2O15144 300 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 TEX28O15482 410 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 IGKV3-15P01624 115 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 DANCRP0C864 163 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 FOLR2P14207 255 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 RPL35AP18077 110 aaKnown RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 MATR3P43243 847 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZFP36L1Q07352 338 aaKnown RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 CD300CQ08708 224 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 CDH18Q13634 790 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 NUP54Q7Z3B4 507 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 METTL4Q8N3J2 472 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 SLAMF9Q96A28 289 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 CNRIP1Q96F85 164 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 PDLIM5Q96HC4 596 aaKnown RBP2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 C4orf45Q96LM5 186 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 FAM218AQ96MZ4 157 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 LPAR4Q99677 370 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 ZNF577Q9BSK1 485 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 NYXQ9GZU5 481 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 TLE6Q9H808 572 aa2.64□□□□□ -1.99
HMGB1P33-201ENST00000563485 B3GAT2Q9NPZ5 323 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms