RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 DNASE1P24855 282 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ADSLP30566 484 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 CHRNB4P30926 498 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 CD68P34810 354 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 EMP2P54851 167 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 WNT3AP56704 352 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF33BQ06732 778 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 RPA4Q13156 261 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 TUBA3CQ13748 450 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 KIR2DS3Q14952 304 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 E4F1Q66K89 784 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 TUBA3EQ6PEY2 450 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 TMEM205Q6UW68 189 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 PAMR1Q6UXH9 720 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 CEP128Q6ZU80 1094 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 MICALCLQ6ZW33 695 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF571Q7Z3V5 609 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 BEST3Q8N1M1 668 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 CPSF7Q8N684 471 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 PLD5Q8N7P1 536 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 LINC01555Q8NAE3 123 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 NEK11Q8NG66 645 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 FAM57AQ8TBR7 257 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 OLFM3Q96PB7 478 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ERGIC2Q96RQ1 377 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 GPATCH1Q9BRR8 931 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ISCUQ9H1K1 167 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ASB8Q9H765 288 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 MRPL47Q9HD33 250 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 KLHL1Q9NR64 748 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 RASSF1Q9NS23 344 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 UBP1Q9NZI7 540 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 HACD3Q9P035 362 aa7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 ZNF282Q9UDV7 671 aaPredicted RBP7.33□□□□□ -1.24
HERPUD1-206ENST00000563343 FAM237BA0A1B0GVD1 139 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 ISM1B1AKI9 464 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CTSVO60911 334 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 NEURL1O76050 574 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 ATE1O95260 518 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 EPOP01588 193 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 ATP1B2P14415 290 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 PTGER1P34995 402 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CD96P40200 585 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 GRIA3P42263 894 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 ST13P50502 369 aaKnown RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 YBX1P67809 324 aaKnown RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 OCA2Q04671 838 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 SLC1A5Q15758 541 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 FAM214AQ32MH5 1076 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 TEX44Q53QW1 395 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 TCTE1Q5JU00 501 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 FKBP15Q5T1M5 1219 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 FCRLBQ6BAA4 426 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 SPINK14Q6IE38 97 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CCDC70Q6NSX1 233 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 NAPRTQ6XQN6 538 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 GLT6D1Q7Z4J2 308 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 GALNTL5Q7Z4T8 443 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CAMKMTQ7Z624 323 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CCDC71Q8IV32 467 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 TBC1D21Q8IYX1 336 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 EID3Q8N140 333 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 TAB3Q8N5C8 712 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 OR5K2Q8NHB8 316 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 BLOC1S5Q8TDH9 187 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 MRGPRX2Q96LB1 330 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 C10orf90Q96M02 699 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 RNF157Q96PX1 679 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 THAP2Q9H0W7 228 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 KCNJ16Q9NPI9 418 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 IP6K2Q9UHH9 426 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 FKBPLQ9UIM3 349 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 PLAGL1Q9UM63 463 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 PKP3Q9Y446 797 aa7.32□□□□□ -1.24
HERPUD1-206ENST00000563343 A0A0A6YYK5 440 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 HYKKA2RU49 373 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 LGALS16A8MUM7 142 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 FFAR3O14843 346 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 STX7O15400 261 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 GPR42O15529 346 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 NRP2O60462 931 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 MAN1A2O60476 641 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 SP1P08047 785 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 CCDC172P0C7W6 258 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 MYBL1P10243 752 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 CDK11BP21127 795 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PTPN3P26045 913 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PCSK6P29122 969 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 EEF1DP29692 281 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PKLRP30613 574 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PRKCIP41743 596 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 TAS2R40P59535 323 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 AP1B1Q10567 949 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 MSLNQ13421 630 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 PDK2Q15119 407 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 OR1C1Q15619 314 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 DEFB113Q30KQ7 82 aa7.31□□□□□ -1.24
HERPUD1-206ENST00000563343 ZC3H12BQ5HYM0 836 aaKnown RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms