RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 PHGDHO43175 533 aaKnown RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 ZBTB14O43829 449 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 RAD1O60671 282 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 CTSVO60911 334 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SNRNP200O75643 2136 aaKnown RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 C8GP07360 202 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 MYBL2P10244 700 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 HSD17B2P37059 387 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 GRIA3P42263 894 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 ARL4DP49703 201 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 POU4F1Q01851 419 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SP140Q13342 867 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 NAB1Q13506 487 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SF1Q15637 639 aaKnown RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 PPP1R3AQ16821 1122 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 COL28A1Q2UY09 1125 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 DEFB110Q30KQ9 67 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 TMTC4Q5T4D3 741 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 GRTP1Q5TC63 336 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 LRRC8EQ6NSJ5 796 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 FIGLAQ6QHK4 219 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SUSD1Q6UWL2 747 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SBSNQ6UWP8 590 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 LRRC69Q6ZNQ3 347 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 VASH2Q86V25 355 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 BPHLQ86WA6 291 aaPredicted RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 PPP1R3BQ86XI6 285 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 CTAGE3PQ8IX95 158 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 IFT20Q8IY31 132 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 MYO1HQ8N1T3 1032 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 OR2L3Q8NG85 312 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SMPDL3AQ92484 453 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SLC22A18Q96BI1 424 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 FCRL4Q96PJ5 515 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 MIPEPQ99797 713 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 ULBP3Q9BZM4 244 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SPRTNQ9H040 489 aaPredicted RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 EPB41L4BQ9H329 900 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 PRORYQ9H606 182 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 AKIRIN1Q9H9L7 192 aaPredicted RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 POPDC3Q9HBV1 291 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 CPNE5Q9HCH3 593 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SLC6A20Q9NP91 592 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 SOHLH2Q9NX45 425 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 STOX2Q9P2F5 926 aaPredicted RBP8.22□□□□□ -1.09
UBR1-204ENST00000563239 LNPEPQ9UIQ6 1025 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 RARRES3Q9UL19 164 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
UBR1-204ENST00000563239 PTPRQQ9UMZ3 2332 aa8.21□□□□□ -1.09
UBR1-204ENST00000563239 LOC101059948A0A1B0GTJ6 334 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 TMEM150CB9EJG8 249 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 HAX1O00165 279 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 KIAA0754O94854 1291 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 FKBP9O95302 570 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ACSL3O95573 720 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 SYF2O95926 243 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 NTRK1P04629 796 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 F8A1P23610 371 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 MAP4P27816 1152 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 SPRP35270 261 aaPredicted RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 GCGRP47871 477 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ILF2Q12905 390 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 DLG1Q12959 904 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 MAP7Q14244 749 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 USP10Q14694 798 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 ZNF425Q6IV72 752 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 LCN10Q6JVE6 187 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 FBXO42Q6P3S6 717 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 CEP128Q6ZU80 1094 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 CMC1Q7Z7K0 106 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 MCATQ8IVS2 390 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 GSPT2Q8IYD1 628 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 CACNA2D3Q8IZS8 1091 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 NLGN4XQ8N0W4 816 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 SPATA6LQ8N4H0 392 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 RAB42Q8N4Z0 105 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 NKAPQ8N5F7 415 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 GALNT6Q8NCL4 622 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 NLGN4YQ8NFZ3 816 aaPredicted RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 OR8K5Q8NH50 307 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 MCOLN3Q8TDD5 553 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 SNRNP27Q8WVK2 155 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 ANKRD7Q92527 254 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ZUFSPQ96AP4 578 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 UBXN10Q96LJ8 280 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 CCDC138Q96M89 665 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ZNF285Q96NJ3 590 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 CCNL2Q96S94 520 aaPredicted RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 CYTH2Q99418 400 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ACAT2Q9BWD1 397 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 TSPYL1Q9H0U9 437 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ANKZF1Q9H8Y5 726 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 SYTL2Q9HCH5 934 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 ENAMQ9NRM1 1142 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 TAC3Q9UHF0 121 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 NOVA2Q9UNW9 492 aaKnown RBP8.21□□□□□ -1.1
UBR1-204ENST00000563239 SH2B3Q9UQQ2 575 aa8.21□□□□□ -1.1
UBR1-204ENST00000563239 OR2A25A4D2G3 310 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 NPEPPSL1A6NEC2 478 aa8.2□□□□□ -1.1
UBR1-204ENST00000563239 TARM1B6A8C7 271 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms