RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 TM9SF3Q9HD45 589 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 ARMCX1Q9P291 453 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 CIDEBQ9UHD4 219 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 TAGLN3Q9UI15 199 aa13.83□□□□□ -0.2
COMMD4-205ENST00000562310 PNMA8BQ9ULN7 279 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-205ENST00000562310 KIR2DS5A0A0G2JLQ3 304 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 A0A0G2JNG1 304 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PRR5-ARHGAP8B1AHC4 643 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 E7EQ34 232 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 H0YIV9 168 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 KIR2DS3K7RE56 304 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 TLR4O00206 839 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 FFAR3O14843 346 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 GPR42O15529 346 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 WFS1O76024 890 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PDGFBP01127 241 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ESRRAP11474 423 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 TDGF1P13385 188 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 CTSEP14091 401 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 IDO1P14902 403 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 NME1P15531 152 aaKnown RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PCSK2P16519 638 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 BCKDHBP21953 392 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 SHMT2P34897 504 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 SCTRP47872 440 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 HTR6P50406 440 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PRKG2Q13237 762 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 MAD2L1Q13257 205 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 TSTA3Q13630 321 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 KIR2DS5Q14953 304 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 MAPRE2Q15555 327 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ZRSR2Q15696 482 aaKnown RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 GSTA3Q16772 222 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 THEMIS2Q5TEJ8 643 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 FRG2Q64ET8 278 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ATG9BQ674R7 924 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 SLCO4C1Q6ZQN7 724 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 TRIM46Q7Z4K8 759 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 LONP2Q86WA8 852 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 NRROSQ86YC3 692 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 AVL9Q8NBF6 648 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ZFPM2Q8WW38 1151 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 SLC5A11Q8WWX8 675 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 UBE2E3Q969T4 207 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 CXorf40BQ96DE9 158 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 NECAB3Q96P71 396 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 FRG2BQ96QU4 278 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ARL8BQ9NVJ2 186 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 APOBEC3BQ9UH17 382 aaKnown RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 ZNF490Q9ULM2 529 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PLAGL1Q9UM63 463 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 PCDHGA11Q9Y5H2 935 aa13.82□□□□□ -0.2
COMMD4-205ENST00000562310 COPG1Q9Y678 874 aaKnown RBP13.82□□□□□ -0.2
COMMD4-205ENST00000562310 TNRC6BQ9UPQ9 1833 aaKnown RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TMEM221A6NGB7 291 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 OR52A4PA6NMU1 304 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 M0R296 226 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 SCAMP1O15126 338 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 VILLO15195 856 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 CCNDBP1O95273 360 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 CBX6O95503 412 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 CSF2P04141 144 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 WNT1P04628 370 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 HSD3B1P14060 373 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 NPPBP16860 134 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 JUNDP17535 347 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 HSD3B2P26439 372 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PLA2G5P39877 138 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 FNTBP49356 437 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 MRPL19P49406 292 aaKnown RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 NCALDP61601 193 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 ERVK-8P63133 956 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 DMWDQ09019 674 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 CSTF3Q12996 717 aaKnown RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 KLF10Q13118 480 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 DOC2AQ14183 400 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 ABRAXAS2Q15018 415 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 ELOCQ15369 112 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 NR6A1Q15406 480 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 CPSF6Q16630 551 aaKnown RBP eCLIP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 HIST2H2ACQ16777 129 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 IMPG1Q17R60 797 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 SPRED3Q2MJR0 410 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TCHHL1Q5QJ38 904 aaPredicted RBP13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TMEM198Q66K66 360 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 HIST2H2AA3Q6FI13 130 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TMPRSS11BQ86T26 416 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 C17orf64Q86WR6 236 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TREML1Q86YW5 311 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 TRIM48Q8IWZ4 208 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 DEFB119Q8N690 84 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 OR52E1Q8NGJ3 308 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 C1orf216Q8TAB5 229 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 SELENOMQ8WWX9 145 aa13.81□□□□□ -0.2
COMMD4-205ENST00000562310 NEIL2Q969S2 332 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms