RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 SH3BP2P78314 561 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 NAA30Q147X3 362 aaPredicted RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 TGFBIQ15582 683 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 OR4D1Q15615 310 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 TSNQ15631 228 aaKnown RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 SNAP47Q5SQN1 464 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 MBOAT1Q6ZNC8 495 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 SH2D5Q6ZV89 423 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 TAOK1Q7L7X3 1001 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 DNAJC22Q8N4W6 341 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 OR8K5Q8NH50 307 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 UHMK1Q8TAS1 419 aaKnown RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 ZUFSPQ96AP4 578 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 ZNF501Q96CX3 271 aaPredicted RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 TCTN2Q96GX1 697 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 TMEM109Q9BVC6 243 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 PSMC3IPQ9P2W1 217 aaPredicted RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 CTNNAL1Q9UBT7 734 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 KLHL3Q9UH77 587 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 PILRAQ9UKJ1 303 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 ACOT9Q9Y305 439 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 PCDHB11Q9Y5F2 797 aa12.93□□□□□ -0.34
CDH1-204ENST00000562118 KMT2BQ9UMN6 2715 aaPredicted RBP12.93□□□□□ -0.34
CDH1-204ENST00000562118 ITPR1Q14643 2758 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 A0A096LPK6 155 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 SLC9B1P1A6NJY1 282 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 A8MU76 341 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 POC1B-GALNT4F8VUJ3 575 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 TLX3O43711 291 aaPredicted RBP12.92□□□□□ -0.34
CDH1-204ENST00000562118 KLK8O60259 260 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 KERAO60938 352 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 RASSF9O75901 435 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 KRT37O76014 449 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 TNFSF15O95150 251 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 DLGAP3O95886 979 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 SNRPAP09012 282 aaKnown RBP12.92□□□□□ -0.34
CDH1-204ENST00000562118 JMJD7P0C870 316 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 MTHFD2P13995 350 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PVRP15151 417 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 CDH3P22223 829 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 CCND1P24385 295 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PSMB5P28074 263 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 GMPRP36959 345 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 KCNC1P48547 511 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 HNMTP50135 292 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 TBPL1P62380 186 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 ABATP80404 500 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 IRF9Q00978 393 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 ACY1Q03154 408 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PRDX1Q06830 199 aaKnown RBP12.92□□□□□ -0.34
CDH1-204ENST00000562118 CYP4F3Q08477 520 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 NAA25Q14CX7 972 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDH1-204ENST00000562118 KIAA1614Q5VZ46 1190 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 FCRL6Q6DN72 434 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 CYB5D1Q6P9G0 228 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 FBXO38Q6PIJ6 1188 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 AGTRAPQ6RW13 159 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 LCTLQ6UWM7 567 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 CDHR3Q6ZTQ4 885 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 RNF44Q7L0R7 432 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 TRIM73Q86UV7 250 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 LCA5Q86VQ0 697 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PROSER1Q86XN7 944 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 DTX1Q86Y01 620 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 MDM1Q8TC05 714 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 UBTD2Q8WUN7 234 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 ATL1Q8WXF7 558 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 RHBDF1Q96CC6 855 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 SARGQ9BW04 601 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 ASPSCR1Q9BZE9 553 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PCBD2Q9H0N5 130 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 NMRAL1Q9HBL8 299 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 FAM60AQ9NP50 221 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 SLC6A20Q9NP91 592 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 THSD1Q9NS62 852 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 FOXJ2Q9P0K8 574 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 PISDQ9UG56 409 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 TMEM184BQ9Y519 407 aaPredicted RBP12.92□□□□□ -0.34
CDH1-204ENST00000562118 IKBKGQ9Y6K9 419 aa12.92□□□□□ -0.34
CDH1-204ENST00000562118 DSPP15924 2871 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 LOC400499M0QZD8 3231 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 ISM1B1AKI9 464 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TRIM49D1C9J1S8 452 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TAF4O00268 1085 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CTIFO43310 598 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 HCRTR1O43613 425 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 PRAMEF10O60809 474 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 HIST1H2AGP0C0S8 130 aaPredicted RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 EBLN1P0CF75 366 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 HIST1H2ADP20671 130 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 MAGP20916 626 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 TYK2P29597 1187 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 SEPHS1P49903 392 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 YBX1P67809 324 aaKnown RBP12.91□□□□□ -0.34
CDH1-204ENST00000562118 PCDH1Q08174 1060 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 E2F2Q14209 437 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 MAP7Q14244 749 aa12.91□□□□□ -0.34
CDH1-204ENST00000562118 CSHL1Q14406 222 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms