RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 GPR62Q9BZJ7 368 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 NXF2Q9GZY0 626 aaKnown RBP12.97□□□□□ -0.33
CLK3-206ENST00000562078 DUSP21Q9H596 190 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 EVA1BQ9NVM1 165 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
CLK3-206ENST00000562078 PCDHB14Q9Y5E9 798 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 LOC100506127A0A0U1RQW1 187 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 OR2A25A4D2G3 310 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 BCKDKO14874 412 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 BET1O15155 118 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 ACSL4O60488 711 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MAFKO60675 156 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MT-CYBP00156 380 aaPredicted RBP12.97□□□□□ -0.33
CLK3-206ENST00000562078 TRAPPC2P0DI81 140 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 TRAPPC2BP0DI82 140 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 CCNCP24863 283 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 ITGB8P26012 769 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 PBX3P40426 434 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 SLC12A2P55011 1212 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 ALDH6A1Q02252 535 aaKnown RBP12.97□□□□□ -0.33
CLK3-206ENST00000562078 ZMYND11Q15326 602 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 PAGE3Q5JUK9 113 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 ARMC4Q5T2S8 1044 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 PIK3R6Q5UE93 754 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 NAPEPLDQ6IQ20 393 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 METTL2BQ6P1Q9 378 aaKnown RBP12.97□□□□□ -0.33
CLK3-206ENST00000562078 PAMR1Q6UXH9 720 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MON1AQ86VX9 555 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 NLRP8Q86W28 1048 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MIER2Q8N344 545 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 YIPF7Q8N8F6 280 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 C7orf57Q8NEG2 295 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 HEXDCQ8WVB3 486 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 Q96MT0 163 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 TRIM54Q9BYV2 358 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MCOLN1Q9GZU1 580 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 MUC13Q9H3R2 512 aa12.97□□□□□ -0.33
CLK3-206ENST00000562078 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 A0A0B4J293 547 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 NT5C1B-RDH14C9J2C7 533 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 SMLR1H3BR10 107 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 SYN3O14994 580 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 CYP4B1P13584 511 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 CPB1P15086 417 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 ATP5F1P24539 256 aaPredicted RBP12.96□□□□□ -0.33
CLK3-206ENST00000562078 RYKP34925 604 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 GRK5P34947 590 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 HTR7P34969 479 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 SLC11A1P49279 550 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 ZNF33AQ06730 810 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 RNF135Q8IUD6 432 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 CRIPAKQ8N1N5 446 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 CPA6Q8N4T0 437 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 IPMKQ8NFU5 416 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 RNF31Q96EP0 1072 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 GIMAP5Q96F15 307 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 KIFC1Q9BW19 673 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 FBXO44Q9H4M3 255 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 EML4Q9HC35 981 aaKnown RBP12.96□□□□□ -0.33
CLK3-206ENST00000562078 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 RAPGEFL1Q9UHV5 662 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 TLR6Q9Y2C9 796 aa12.96□□□□□ -0.33
CLK3-206ENST00000562078 ASPDHA6ND91 283 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 MITFO75030 526 aaPredicted RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 OR2B3O76000 313 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 PGRP06401 933 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 CLEC2LP0C7M8 214 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 ADORA3P0DMS8 318 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 RAP2AP10114 183 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 HNF4AP41235 474 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 SRP54P61011 504 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 EFEMP1Q12805 493 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 CDH17Q12864 832 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 GNA13Q14344 377 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 TAB1Q15750 504 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 MSANTD2Q6P1R3 559 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 GALNT5Q7Z7M9 940 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 TMEM179BQ7Z7N9 219 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 PLCZ1Q86YW0 608 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 VPS37AQ8NEZ2 397 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 ITFG1Q8TB96 612 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 FBLIM1Q8WUP2 373 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 SLC38A4Q969I6 547 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 TMCO6Q96DC7 493 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 TRMT61AQ96FX7 289 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 MRPL57Q9BQC6 102 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 MCCC2Q9HCC0 563 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 INTS7Q9NVH2 962 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 TRMT6Q9UJA5 497 aaKnown RBP12.96□□□□□ -0.34
CLK3-206ENST00000562078 TPRKBQ9Y3C4 175 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 HSPB11Q9Y547 144 aa12.96□□□□□ -0.34
CLK3-206ENST00000562078 TOR1AO14656 332 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 KIAA0355O15063 1070 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 RGS10O43665 173 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 NDUFA2O43678 99 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 TSC22D2O75157 780 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 PEX14O75381 377 aa12.95□□□□□ -0.34
CLK3-206ENST00000562078 TBX18O95935 607 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms