RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 TESCQ96BS2 214 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 MED8Q96G25 268 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 APOLD1Q96LR9 279 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 TSSK3Q96PN8 268 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 SH3GL1Q99961 368 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 C9orf16Q9BUW7 83 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 THUMPD3Q9BV44 507 aaKnown RBP9.52□□□□□ -0.88
SMG1-205ENST00000561947 YIPF3Q9GZM5 350 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 ZNF696Q9H7X3 374 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 TRPV4Q9HBA0 871 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 THG1LQ9NWX6 298 aaKnown RBP9.52□□□□□ -0.88
SMG1-205ENST00000561947 GULP1Q9UBP9 304 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 MAN2B2Q9Y2E5 1009 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 AP3M1Q9Y2T2 418 aa9.52□□□□□ -0.88
SMG1-205ENST00000561947 A0A096LPI6 279 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 H3BM21 787 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 MMP20O60882 483 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 ERN1O75460 977 aaKnown RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 SLC16A8O95907 504 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 HNF4AP41235 474 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 GRIA2P42262 883 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 POLE2P56282 527 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 DPTQ07507 201 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 DOC2AQ14183 400 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 LRIF1Q5T3J3 769 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 NAIF1Q69YI7 327 aaPredicted RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 ERN2Q76MJ5 926 aaKnown RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 CARM1Q86X55 608 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 RNF175Q8N4F7 328 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 CBR4Q8N4T8 237 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 MFSD2AQ8NA29 543 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 FBXO15Q8NCQ5 510 aaPredicted RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 ZNF548Q8NEK5 533 aaPredicted RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 TNIP2Q8NFZ5 429 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 CSGALNACT1Q8TDX6 532 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 OR4K3Q96R72 315 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 CENPKQ9BS16 269 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 PAIP1Q9H074 479 aaKnown RBP9.52□□□□□ -0.89
SMG1-205ENST00000561947 OR2AG1Q9H205 316 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 KCNH6Q9H252 994 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 IKZF5Q9H5V7 419 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 RMND5AQ9H871 391 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 C8orf4Q9NR00 106 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 DYRK4Q9NR20 520 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 GDE1Q9NZC3 331 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 CIDEBQ9UHD4 219 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 PPT2Q9UMR5 302 aa9.52□□□□□ -0.89
SMG1-205ENST00000561947 GMNNO75496 209 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 GTF2H3Q13889 308 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 MAP7Q14244 749 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 GTDC1Q4AE62 458 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 LIN52Q52LA3 116 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 TMTC4Q5T4D3 741 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 NOXRED1Q6NXP6 359 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 SPRED1Q7Z699 444 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 TRAPPC5Q8IUR0 188 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 RIMKLAQ8IXN7 391 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 CFAP206Q8IYR0 622 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 OR10A6Q8NH74 314 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 SUSD6Q92537 303 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 ITCHQ96J02 903 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 HHIPQ96QV1 700 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 SEPHS2Q99611 448 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 OSBPL6Q9BZF3 934 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 GORASP2Q9H8Y8 452 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 SERHLQ9NQF3 203 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 SPATA6Q9NWH7 488 aaPredicted RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 YBX2Q9Y2T7 364 aaKnown RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 V9GYQ6 96 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 LAMA3Q16787 3333 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 TBC1D3BA6NDS4 549 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 C1QTNF3-AMACRE9PGA6 284 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 H0YIV9 168 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 PDLIM1O00151 329 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 ACOX3O15254 700 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 C1orf105O95561 183 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 LDLRP01130 860 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 HSD3B1P14060 373 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 HOXB9P17482 250 aaPredicted RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 HSD3B2P26439 372 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 OPRD1P41143 372 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 IL12RB1P42701 662 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 NHSL2Q5HYW2 709 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 ATG9BQ674R7 924 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 TANGO2Q6ICL3 276 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 VITQ6UXI7 678 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 MSANTD1Q6ZTZ1 278 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 DSG4Q86SJ6 1040 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 MMAAQ8IVH4 418 aaKnown RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 CPA6Q8N4T0 437 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 LINC00615Q96LM1 132 aaPredicted RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 RNF145Q96MT1 663 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 CPPED1Q9BRF8 314 aaPredicted RBP9.51□□□□□ -0.89
SMG1-205ENST00000561947 CHID1Q9BWS9 393 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 EBPLQ9BY08 206 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 TRIM39Q9HCM9 518 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 DZANK1Q9NVP4 752 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 VPS29Q9UBQ0 182 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 OAZ3Q9UMX2 235 aa9.51□□□□□ -0.89
SMG1-205ENST00000561947 PCDHB14Q9Y5E9 798 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms