RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TMEM173Q86WV6 379 aaPredicted RBP3.58□□□□□ -1.84
HERC1-215ENST00000561436 VSIG1Q86XK7 387 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 CEP57Q86XR8 500 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 GMCL1P1Q8NEA9 526 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 EXD1Q8NHP7 514 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 AFAP1L1Q8TED9 768 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 CHURC1Q8WUH1 139 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 TEKT4Q8WW24 435 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 ATL1Q8WXF7 558 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 FIG4Q92562 907 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 VPS33AQ96AX1 596 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 BICD1Q96G01 975 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SCMH1Q96GD3 660 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 MARK4Q96L34 752 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 GBP5Q96PP8 586 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SPAG5Q96R06 1193 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 RAD9AQ99638 391 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 MEIS3Q99687 375 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 EDEM3Q9BZQ6 932 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 ALDH8A1Q9H2A2 487 aaPredicted RBP3.58□□□□□ -1.84
HERC1-215ENST00000561436 CHMP4BQ9H444 224 aaKnown RBP3.58□□□□□ -1.84
HERC1-215ENST00000561436 ANKZF1Q9H8Y5 726 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SLC38A10Q9HBR0 1119 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 HHATLQ9HCP6 504 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 DPP3Q9NY33 737 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 SLC24A2Q9UI40 661 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 PADI3Q9ULW8 664 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 B3GALT5Q9Y2C3 310 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 CACNA1GO43497 2377 aa3.58□□□□□ -1.84
HERC1-215ENST00000561436 A0A0G2JPF8 293 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MAGEA13PA6NCF6 341 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 OR5K3A6NET4 321 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 HNRNPCL3B7ZW38 293 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MPHOSPH10O00566 681 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 DVL1O14640 695 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CTAGE5O15320 804 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MID1O15344 667 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ZNHIT1O43257 154 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 DCXO43602 365 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 TBX10O75333 385 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 SURF6O75683 361 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 PSMD10O75832 226 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 BMP10O95393 424 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PMS2P2O95744 297 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PGK2P07205 417 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 LINGO3P0C6S8 592 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 FAM106CPP0CH98 169 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 HNRNPCL4P0DMR1 293 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 EEF2P13639 858 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 CORO1AP31146 461 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 MTHFRP42898 656 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PDLIM4P50479 330 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CDK3Q00526 305 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 DLG1Q12959 904 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 TRAF3Q13114 568 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 GTF2H2Q13888 395 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CKAP5Q14008 2032 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PSME4Q14997 1843 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ZNF628Q5EBL2 1059 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 GCNT6Q5T4J0 391 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ALS2CLQ60I27 953 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 GTF2H2CQ6P1K8 395 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ARMCX2Q7L311 632 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PLPPR4Q7Z2D5 763 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 KMT5CQ86Y97 462 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CEP97Q8IW35 865 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MFN1Q8IWA4 741 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 THNSL1Q8IYQ7 743 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MUC20Q8N307 709 aaPredicted RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 FAM133AQ8N9E0 248 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 NEXN-AS1Q8NBZ9 246 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ZNF114Q8NC26 417 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 RBM15BQ8NDT2 890 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 OR5R1Q8NH85 324 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CFAP61Q8NHU2 1237 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 WDR20Q8TBZ3 569 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 SLC44A1Q8WWI5 657 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ABTB1Q969K4 478 aaPredicted RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 PHF21AQ96BD5 680 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ARSGQ96EG1 525 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 MED30Q96HR3 178 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 LYZL4Q96KX0 146 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 FAM81BQ96LP2 452 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 ZMAT2Q96NC0 199 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 DUX5Q96PT3 197 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 TGS1Q96RS0 853 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 MTG1Q9BT17 334 aaPredicted RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 NUP85Q9BW27 656 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 NOL11Q9H8H0 719 aaKnown RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 ZWILCHQ9H900 591 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 TCP11L1Q9NUJ3 509 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 HAO2Q9NYQ3 351 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 SELENONQ9NZV5 590 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 CRNNQ9UBG3 495 aaPredicted RBP3.57□□□□□ -1.84
HERC1-215ENST00000561436 MALT1Q9UDY8 824 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 GIMAP2Q9UG22 337 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 PROCRQ9UNN8 238 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 YIPF1Q9Y548 306 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 NME7Q9Y5B8 376 aa3.57□□□□□ -1.84
HERC1-215ENST00000561436 BRCA2P51587 3418 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms