RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 CDH17Q12864 832 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 WASHC2DQ5SRD0 308 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF324BQ6AW86 544 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 SP5Q6BEB4 398 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 PRMT9Q6P2P2 845 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 LINC00696Q6ZRV3 163 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 SHISA6Q6ZSJ9 500 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 NLRP9Q7RTR0 991 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 ZGRF1Q86YA3 2104 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 C2orf73Q8N5S3 287 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 LMNTD1Q8N9Z9 388 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 CATSPER1Q8NEC5 780 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 PEX13Q92968 403 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 RELTQ969Z4 430 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 RAD51AP1Q96B01 352 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 MOCOSQ96EN8 888 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 IL17FQ96PD4 163 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 CRB3Q9BUF7 120 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 RUBCNLQ9H714 662 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF304Q9HCX3 659 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 OLAHQ9NV23 265 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 EPN1Q9Y6I3 576 aaPredicted RBP11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
CARMIL3-204ENST00000561354 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 IGLV3-12A0A075B6K2 115 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ARHGAP10A1A4S6 786 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 PCDH17O14917 1159 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 CTSVO60911 334 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 JRKO75564 520 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 USP1O94782 785 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 SUN1O94901 812 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ACPPP15309 386 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 FDXRP22570 491 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ADRA1DP25100 572 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 AOAHP28039 575 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 NAP1L1P55209 391 aaKnown RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 VSX2P58304 361 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 OCA2Q04671 838 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 KLC1Q07866 573 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 KLF1Q13351 362 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 NAA30Q147X3 362 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 INAQ16352 499 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 FASTKD1Q53R41 847 aaKnown RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 TSTD2Q5T7W7 516 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ATG9BQ674R7 924 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 TTC23LQ6PF05 361 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF534Q76KX8 674 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 TAX1BP1Q86VP1 789 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 FJX1Q86VR8 437 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 KBTBD2Q8IY47 623 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 C17orf53Q8N3J3 647 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 METTL27Q8N6F8 245 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 DNAAF3Q8N9W5 541 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 OR4L1Q8NH43 312 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 CFAP61Q8NHU2 1237 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 HMGCLL1Q8TB92 370 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 STT3BQ8TCJ2 826 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 LKAAEAR1Q8TD35 194 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 MIEF2Q96C03 454 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 TMEM121Q9BTD3 319 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF282Q9UDV7 671 aaPredicted RBP11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 SLC2A6Q9UGQ3 507 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 CIDEBQ9UHD4 219 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 MRFAP1Q9Y605 127 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 MAU2Q9Y6X3 613 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 FAM169AQ9Y6X4 670 aa11.3□□□□□ -0.6
CARMIL3-204ENST00000561354 CENPEQ02224 2701 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 A0A1W2PQ72 361 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 GRID2IPA4D2P6 1211 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 IQCF5A8MTL0 148 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 PRSS44E7EML9 344 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 MAP2K7O14733 419 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 IPO7O95373 1038 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 MED26O95402 600 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ZGLP1P0C6A0 271 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 STIP1P31948 543 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 TNFSF10P50591 281 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 TDGF1P3P51864 188 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 EMP3P54852 163 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ARG2P78540 354 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ART3Q13508 389 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 SEMA3AQ14563 771 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 TMED2Q15363 201 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 AARS2Q5JTZ9 985 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 TMEM139Q8IV31 216 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 RAB42Q8N4Z0 105 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 UBL4BQ8N7F7 174 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 OR2L3Q8NG85 312 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 OR6P1Q8NGX9 317 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 PSMF1Q92530 271 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 NR4A3Q92570 626 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 HAS2Q92819 552 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF778Q96MU6 729 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 UNKQ9C0B0 810 aaKnown RBP11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 ZNF160Q9HCG1 818 aa11.29□□□□□ -0.6
CARMIL3-204ENST00000561354 COPG2Q9UBF2 871 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms