RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 SBSNQ6UWP8 590 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 MBOAT1Q6ZNC8 495 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 CDHR3Q6ZTQ4 885 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 NKAPQ8N5F7 415 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 ZNF501Q96CX3 271 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 TSPAN17Q96FV3 270 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 WBP1Q96G27 269 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 PARVBQ9HBI1 364 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 SYTL2Q9HCH5 934 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 FAM60AQ9NP50 221 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 PDE7BQ9NP56 450 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 FGF21Q9NSA1 209 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 STOX2Q9P2F5 926 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 TMEM184BQ9Y519 407 aaPredicted RBP14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 KLK4Q9Y5K2 254 aa14.93□□□□□ -0.02
RABGGTA-219ENST00000560871 EIF4E1BA6NMX2 242 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 STMND1H3BQB6 276 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 RIPK2O43353 540 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SLU7O95391 586 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SYF2O95926 243 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 ABHD2P08910 425 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 STMN1P16949 149 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 ZNF28P17035 718 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SLC12A2P55011 1212 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 RAB10P61026 200 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 TUBB4BP68371 445 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 KIAA1614Q5VZ46 1190 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SUSD1Q6UWL2 747 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 CMC1Q7Z7K0 106 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 PPP1R3BQ86XI6 285 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 PPFIBP2Q8ND30 876 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 OR2L3Q8NG85 312 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SLC44A1Q8WWI5 657 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 SMPDL3AQ92484 453 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 ANKRD7Q92527 254 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 TTC9Q92623 222 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 CCDC138Q96M89 665 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 EPB41L4BQ9H329 900 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 RARRES3Q9UL19 164 aa14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 NOVA2Q9UNW9 492 aaKnown RBP14.92□□□□□ -0.02
RABGGTA-219ENST00000560871 A0A087WUV0 522 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 NPEPPSL1A6NEC2 478 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 ZNF839A8K0R7 811 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 H3BMH7 237 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 CDC7O00311 574 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 HCRTR1O43613 425 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 STK17BO94768 372 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 PRB1P04280 392 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 ENO2P09104 434 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 PMS2P54278 862 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 TBPL1P62380 186 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 YBX1P67809 324 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 SRSF6Q13247 344 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 BMPR2Q13873 1038 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 SF1Q15637 639 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 ZXDCQ2QGD7 858 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 DEFB110Q30KQ9 67 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 FCRL6Q6DN72 434 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 TRMT10CQ7L0Y3 403 aaKnown RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 BPHLQ86WA6 291 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 SYTL1Q8IYJ3 562 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 MCOLN3Q8TDD5 553 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 TCTN2Q96GX1 697 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 UBXN10Q96LJ8 280 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 FCRL4Q96PJ5 515 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 PAFAH2Q99487 392 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 DERL2Q9GZP9 239 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 SLC6A20Q9NP91 592 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 PILRAQ9UKJ1 303 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 KLHL20Q9Y2M5 609 aa14.91□□□□□ -0.02
RABGGTA-219ENST00000560871 LOC400499M0QZD8 3231 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 IGKV1-8A0A0C4DH67 115 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 NRP2O60462 931 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 RAD1O60671 282 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 C1QL1O75973 258 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 SLC35E2BP0CK96 405 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 DEKP35659 375 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 GMPRP36959 345 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 GRIA3P42263 894 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 AP1S2P56377 157 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 MAP7Q14244 749 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 TSNQ15631 228 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 MANEAQ5SRI9 462 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 PWWP2BQ6NUJ5 590 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 AGTRAPQ6RW13 159 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 TIPARPQ7Z3E1 657 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 ADAMTSL2Q86TH1 951 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 DNAJC22Q8N4W6 341 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 OR8K5Q8NH50 307 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 OR1L3Q8NH93 324 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 UHMK1Q8TAS1 419 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 NKD1Q969G9 470 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 ISL2Q96A47 359 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 MRRFQ96E11 262 aaKnown RBP14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 MIPEPQ99797 713 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 DHRS4Q9BTZ2 278 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 ACAT2Q9BWD1 397 aa14.9□□□□□ -0.02
RABGGTA-219ENST00000560871 FANCEQ9HB96 536 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms