RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 CACNA1SQ13698 1873 aa13.16□□□□□ -0.3
TRAF3-208ENST00000560371 PLK4O00444 970 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TULP3O75386 442 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 GADD45GO95257 159 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 POU2F1P14859 743 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 EIF2B2P49770 351 aaKnown RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 JAG1P78504 1218 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 INCA1Q0VD86 236 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ZDHHC21Q8IVQ6 265 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TMEM98Q9Y2Y6 226 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 GNB5O14775 395 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 COCHO43405 550 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 B4GALT2O60909 372 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 SCELO95171 688 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 SMCO1Q147U7 214 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 MAPK14Q16539 360 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CYP1B1Q16678 543 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 RASSF6Q6ZTQ3 369 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 NATD1Q8N6N6 113 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 RPL26L1Q9UNX3 145 aaKnown RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 FAM234BA2RU67 622 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 hCG_2039718K7EN88 272 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 M0R2N6 131 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 MPZL2O60487 215 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 PSIP1O75475 530 aaKnown RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 PRAMEF12O95522 483 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CXCR1P25024 350 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 PTGIRP43119 386 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 HM13Q8TCT9 377 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 MAPK15Q8TD08 544 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF347Q96SE7 839 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 FAM129BQ96TA1 746 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 THUMPD1Q9NXG2 353 aaKnown RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 NCDNQ9UBB6 729 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ACSL5Q9ULC5 683 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 LAMTOR5O43504 91 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CD2P06729 351 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ARF3P61204 181 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ARF1P84077 181 aaKnown RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 HYAL2Q12891 473 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ZZZ3Q8IYH5 903 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 NAT8LQ8N9F0 302 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CHST4Q8NCG5 386 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 OR5T3Q8NGG3 340 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 PSMA8Q8TAA3 256 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 SGIP1Q9BQI5 828 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TMEM248Q9NWD8 314 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 C19orf25Q9UFG5 118 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CLEC4AQ9UMR7 237 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 FAM25EA8MYX2 175 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 RGS10O43665 173 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CCNB2O95067 398 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 IDH3AP50213 366 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 ZNF805Q5CZA5 627 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 CRELD2Q6UXH1 353 aaPredicted RBP13.15□□□□□ -0.3
TRAF3-208ENST00000560371 TMIGD1Q6UXZ0 262 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 POC5Q8NA72 575 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 FANCFQ9NPI8 374 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 P2RX2Q9UBL9 471 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 FETUBQ9UGM5 382 aa13.15□□□□□ -0.3
TRAF3-208ENST00000560371 NUP214P35658 2090 aaPredicted RBP13.15□□□□□ -0.31
TRAF3-208ENST00000560371 FOXO6A8MYZ6 492 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 H0YGN5 161 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 SLC30A4O14863 429 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 TNFRSF21O75509 655 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
TRAF3-208ENST00000560371 RENP00797 406 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 CFHP08603 1231 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 PRKAR1AP10644 381 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 MYCLP1P12525 358 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-208ENST00000560371 GFOD2Q3B7J2 385 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 PITRM1Q5JRX3 1037 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 SLC39A5Q6ZMH5 540 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 SLC51AQ86UW1 340 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 GIPC3Q8TF64 312 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 PLEKHG4BQ96PX9 1271 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 ADAM7Q9H2U9 754 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 A0A0D9SEW6 157 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 OAS1P00973 400 aaKnown RBP13.14□□□□□ -0.31
TRAF3-208ENST00000560371 TOR1AIP1Q5JTV8 583 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 GPRC6AQ5T6X5 926 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 MKKSQ9NPJ1 570 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-208ENST00000560371 CTPS2Q9NRF8 586 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 MOCS1Q9NZB8 636 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 NOX1Q9Y5S8 564 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 CABIN1Q9Y6J0 2220 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 TAF4O00268 1085 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 ADAMTS3O15072 1205 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 TSPAN9O75954 239 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 ANGPTL1O95841 491 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 IRF9Q00978 393 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.14□□□□□ -0.31
TRAF3-208ENST00000560371 PAOXQ6QHF9 649 aa13.14□□□□□ -0.31
TRAF3-208ENST00000560371 KLHL6Q8WZ60 621 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms