RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 E7ENX8 843 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 ZBTB14O43829 449 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 SRPX2O60687 465 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-213ENST00000560175 OR2B3O76000 313 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 TSPAN12O95859 305 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 SLC16A8O95907 504 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 C1QAP02745 245 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 PRB1P04280 392 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 SFTPCP11686 197 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 CYP2A7P20853 494 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 CDKN2DP55273 166 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 MRPS25P82663 173 aaKnown RBP12.69□□□□□ -0.38
SMAD3-213ENST00000560175 TAP2Q03519 686 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 CUL1Q13616 776 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 ZC3H12BQ5HYM0 836 aaKnown RBP12.69□□□□□ -0.38
SMAD3-213ENST00000560175 HP1BP3Q5SSJ5 553 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-213ENST00000560175 RBM20Q5T481 1227 aaKnown RBP12.69□□□□□ -0.38
SMAD3-213ENST00000560175 PAQR3Q6TCH7 311 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 SYVN1Q86TM6 617 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 CPNE9Q8IYJ1 553 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 GPR135Q8IZ08 494 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 FBXO36Q8NEA4 188 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 ADAMTS17Q8TE56 1095 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 ZNF480Q8WV37 535 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 EEF1AKMT1Q8WVE0 214 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 SMPDL3AQ92484 453 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 CLIP3Q96DZ5 547 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 GBP5Q96PP8 586 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 RUFY1Q96T51 708 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 ACTL8Q9H568 366 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 STARD5Q9NSY2 213 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 KLHL20Q9Y2M5 609 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 VWA7Q9Y334 891 aa12.69□□□□□ -0.38
SMAD3-213ENST00000560175 IGKV1-8A0A0C4DH67 115 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ZNF839A8K0R7 811 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 SLC16A5O15375 505 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 CTSVO60911 334 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 FDXRP22570 491 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PSMB5P28074 263 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PNLIPRP1P54315 467 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 RPS15P62841 145 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 YBX1P67809 324 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PRDX1Q06830 199 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 C2orf54Q08AI8 447 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 MGAT5Q09328 741 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ILF2Q12905 390 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 NAA25Q14CX7 972 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 UGT8Q16880 541 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 YOD1Q5VVQ6 348 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ZNF425Q6IV72 752 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 FBXO42Q6P3S6 717 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 FAM198BQ6UWH4 519 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 RNF44Q7L0R7 432 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PIWIL4Q7Z3Z4 852 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 SLC26A11Q86WA9 606 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ANKMY2Q8IV38 441 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 SYTL1Q8IYJ3 562 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PROKR1Q8TCW9 393 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 MR1Q95460 341 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 NDNQ99608 321 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ANKMY1Q9P2S6 941 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 SLC17A6Q9P2U8 582 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 TRMT6Q9UJA5 497 aaKnown RBP12.68□□□□□ -0.38
SMAD3-213ENST00000560175 SRPK3Q9UPE1 567 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 PSAT1Q9Y617 370 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 KCNMB2Q9Y691 235 aa12.68□□□□□ -0.38
SMAD3-213ENST00000560175 ZSCAN9O15535 394 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 KATNA1O75449 491 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 KLF7O75840 302 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 TUBB4AP04350 444 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 C8GP07360 202 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 MCM3P25205 808 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 CCR10P46092 362 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 RGS4P49798 205 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 CAV1Q03135 178 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 C19orf57Q0VDD7 668 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 CALCOCO2Q13137 446 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 SP140Q13342 867 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 DEFB110Q30KQ9 67 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ATP1A1-AS1Q5TC04 95 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 HECTD2Q5U5R9 776 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 FAM45BPQ6NSW5 357 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 MRPL14Q6P1L8 145 aaKnown RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ZDHHC24Q6UX98 284 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 TAX1BP1Q86VP1 789 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ZC3HC1Q86WB0 502 aaKnown RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 APLFQ8IW19 511 aaPredicted RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ZBED8Q8IZ13 594 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 FAM45AQ8TCE6 357 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 APOBEC4Q8WW27 367 aaKnown RBP12.67□□□□□ -0.38
SMAD3-213ENST00000560175 THAP4Q8WY91 577 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 ANKRD7Q92527 254 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 CCDC138Q96M89 665 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 OLFM1Q99784 485 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 MIPEPQ99797 713 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 DHRS4Q9BTZ2 278 aa12.67□□□□□ -0.38
SMAD3-213ENST00000560175 DPH5Q9H2P9 285 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms