RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 EDN3P14138 238 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 ADRA1DP25100 572 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 PPARGP37231 505 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 FDFT1P37268 417 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 PRAMEP78395 509 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 ZNF169Q14929 603 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 TMED2Q15363 201 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 SF1Q15637 639 aaKnown RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 RBBP7Q16576 425 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 FASTKD1Q53R41 847 aaKnown RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 AARS2Q5JTZ9 985 aaKnown RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 IRAK1BP1Q5VVH5 260 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 NLRP9Q7RTR0 991 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 SYCE1Q8N0S2 351 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 C2orf73Q8N5S3 287 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 TTC29Q8NA56 475 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 OR6P1Q8NGX9 317 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 CFAP61Q8NHU2 1237 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 GRHL3Q8TE85 626 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 FAR1Q8WVX9 515 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 ZUFSPQ96AP4 578 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 VPS50Q96JG6 964 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 SOX17Q9H6I2 414 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 EPS8L2Q9H6S3 715 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 ETNK1Q9HBU6 452 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.53□□□□□ -0.4
TPM1-220ENST00000559556 CIDEBQ9UHD4 219 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 TCAF1Q9Y4C2 921 aa12.53□□□□□ -0.4
TPM1-220ENST00000559556 IQCF5A8MTL0 148 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 PRMT5O14744 637 aaPredicted RBP12.52□□□□□ -0.41
TPM1-220ENST00000559556 PSMB5P28074 263 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 STIP1P31948 543 aaKnown RBP12.52□□□□□ -0.41
TPM1-220ENST00000559556 GRIA1P42261 906 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 GRIA3P42263 894 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 TTPAP49638 278 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 PER3P56645 1201 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 Q0VFX4 171 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 CDC16Q13042 620 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 FAM214AQ32MH5 1076 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 PPP1R21Q6ZMI0 780 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 SHISA6Q6ZSJ9 500 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 SLC34A3Q8N130 599 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 KRT222Q8N1A0 295 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 DTWD1Q8N5C7 304 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 HMGCLL1Q8TB92 370 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 DNAJB14Q8TBM8 379 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 MRFAP1L1Q96HT8 127 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 HES6Q96HZ4 224 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 THOC3Q96J01 351 aaKnown RBP12.52□□□□□ -0.41
TPM1-220ENST00000559556 SLX1AQ9BQ83 275 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 TRIM56Q9BRZ2 755 aaKnown RBP12.52□□□□□ -0.41
TPM1-220ENST00000559556 CATSPERZQ9NTU4 200 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 MARCH4Q9P2E8 410 aaPredicted RBP12.52□□□□□ -0.41
TPM1-220ENST00000559556 SLC39A10Q9ULF5 831 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 FAM169AQ9Y6X4 670 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 MTORP42345 2549 aa12.52□□□□□ -0.41
TPM1-220ENST00000559556 LIASO43766 372 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 SRPX2O60687 465 aaPredicted RBP12.51□□□□□ -0.41
TPM1-220ENST00000559556 MED26O95402 600 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 FTCDO95954 541 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 HPP00738 406 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 OR1D4P47884 311 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 VSX2P58304 361 aaPredicted RBP12.51□□□□□ -0.41
TPM1-220ENST00000559556 KLC1Q07866 573 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 MFAP5Q13361 173 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 TLR1Q15399 786 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 C1QL3Q5VWW1 255 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 FRMPD2BQ6IN97 320 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 RPUSD3Q6P087 351 aaKnown RBP12.51□□□□□ -0.41
TPM1-220ENST00000559556 ISLR2Q6UXK2 745 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 RNF44Q7L0R7 432 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 KIAA1328Q86T90 577 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 PARP9Q8IXQ6 854 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 METTL27Q8N6F8 245 aaPredicted RBP12.51□□□□□ -0.41
TPM1-220ENST00000559556 OR2L3Q8NG85 312 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 RAD51AP1Q96B01 352 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 CNDP1Q96KN2 507 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 PANX3Q96QZ0 392 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 CRB3Q9BUF7 120 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 FRMD8P1Q9BZ68 369 aaPredicted RBP12.51□□□□□ -0.41
TPM1-220ENST00000559556 P2RY12Q9H244 342 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 GNPTGQ9UJJ9 305 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 ANAPC5Q9UJX4 755 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 MRFAP1Q9Y605 127 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 SPG11Q96JI7 2443 aa12.51□□□□□ -0.41
TPM1-220ENST00000559556 ZFHX3Q15911 3703 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 IGLV3-12A0A075B6K2 115 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 A0A1W2PQ72 361 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 HYKKA2RU49 373 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 KRT87PA6NCN2 255 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 E7EVH7 732 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 KPNA5O15131 536 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 CD3EAPO15446 510 aaKnown RBP12.5□□□□□ -0.41
TPM1-220ENST00000559556 LRRTM2O43300 516 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 NRP2O60462 931 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 C1orf105O95561 183 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ZGLP1P0C6A0 271 aa12.5□□□□□ -0.41
TPM1-220ENST00000559556 ACPPP15309 386 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms