RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 GRM7Q14831 915 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 DPCR1Q3MIW9 517 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 EMC4Q5J8M3 183 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 SIRPB2Q5JXA9 342 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ACER2Q5QJU3 275 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 CCDC183Q5T5S1 534 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 GLT6D1Q7Z4J2 308 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 LINC01555Q8NAE3 123 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 FAM71BQ8TC56 605 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF398Q8TD17 642 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 DTX3LQ8TDB6 740 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 RND1Q92730 232 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 IMMP1LQ96LU5 166 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 C10orf90Q96M02 699 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF285Q96NJ3 590 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 SELENOSQ9BQE4 189 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 XPO4Q9C0E2 1151 aaKnown RBP11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF700Q9H0M5 742 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF304Q9HCX3 659 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 HAUS2Q9NVX0 235 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 CHMP5Q9NZZ3 219 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 MYO1AQ9UBC5 1043 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 TDRKHQ9Y2W6 561 aaKnown RBP11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ROS1P08922 2347 aa11.25□□□□□ -0.61
SMAD3-206ENST00000558739 ABCA1O95477 2261 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 FITM1A5D6W6 292 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 RCCD1A6NED2 376 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 A6NNC1 897 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 FBLP22087 321 aaKnown RBP11.24□□□□□ -0.61
SMAD3-206ENST00000558739 CXCR2P25025 360 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 PRKCIP41743 596 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 PPIDQ08752 370 aaKnown RBP11.24□□□□□ -0.61
SMAD3-206ENST00000558739 KEAP1Q14145 624 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 ZNF468Q5VIY5 522 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-206ENST00000558739 FRMPD2BQ6IN97 320 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 ARSKQ6UWY0 536 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 LANCL3Q6ZV70 420 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 CAMKMTQ7Z624 323 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 CRLF3Q8IUI8 442 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 LIX1LQ8IVB5 337 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 CLYBLQ8N0X4 340 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 EID3Q8N140 333 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 GOT1L1Q8NHS2 421 aaPredicted RBP11.24□□□□□ -0.61
SMAD3-206ENST00000558739 SLC25A51Q9H1U9 297 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 SYNPO2LQ9H987 977 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 FKBPLQ9UIM3 349 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 CBLCQ9ULV8 474 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 ARL5AQ9Y689 179 aa11.24□□□□□ -0.61
SMAD3-206ENST00000558739 LOC102723996A0A087X1L8 192 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 LOC105369274A0A096LPK9 316 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 LOC102723532A0A0G2JNH3 316 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 HYKKA2RU49 373 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 KLHL33A6NCF5 533 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 CCL22O00626 93 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 FTLP02792 175 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-206ENST00000558739 MYBL2P10244 700 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 PPP2R2BQ00005 443 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 KRT31Q15323 416 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 WASHC2DQ5SRD0 308 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 OR4N4Q8N0Y3 316 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 TTC29Q8NA56 475 aaPredicted RBP11.23□□□□□ -0.61
SMAD3-206ENST00000558739 IL17FQ96PD4 163 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 UTP23Q9BRU9 249 aaKnown RBP11.23□□□□□ -0.61
SMAD3-206ENST00000558739 ASB8Q9H765 288 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 OR6C2Q9NZP2 312 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 TRPC4Q9UBN4 977 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 TRPS1Q9UHF7 1281 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 ASF1AQ9Y294 204 aa11.23□□□□□ -0.61
SMAD3-206ENST00000558739 TRIM64A6NGJ6 449 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 TRIM64BA6NI03 449 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 FAM171A2A8MVW0 826 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CDC40O60508 579 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 SRP72O76094 671 aaKnown RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 HEXBP07686 556 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 SP1P08047 785 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 PRSS56P0CW18 603 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CD46P15529 392 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 KIR2DL3P43628 341 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CD151P48509 253 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CDKN1CP49918 316 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 WNT3AP56704 352 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 SNRPNP63162 240 aaKnown RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 NKX6-1P78426 367 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 AP1B1Q10567 949 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 BRD3Q15059 726 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 PCBP2Q15366 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 MAPKAPK3Q16644 382 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CMPK2Q5EBM0 449 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 Q5PR19 223 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 YOD1Q5VVQ6 348 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 ZDHHC20Q5W0Z9 365 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 E4F1Q66K89 784 aaPredicted RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 IRF2BP2Q7Z5L9 587 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
SMAD3-206ENST00000558739 CLDN19Q8N6F1 224 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 PLD5Q8N7P1 536 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 AMER3Q8N944 861 aa11.22□□□□□ -0.61
SMAD3-206ENST00000558739 TMEM178AQ8NBL3 297 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms