RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 DTD2Q96FN9 168 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CENPNQ96H22 339 aaPredicted RBP10.25□□□□□ -0.77
TPM1-210ENST00000558264 ASB16Q96NS5 453 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CCM2Q9BSQ5 444 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 OSBPL11Q9BXB4 747 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CNOT11Q9UKZ1 510 aaKnown RBP10.25□□□□□ -0.77
TPM1-210ENST00000558264 PLAGL1Q9UM63 463 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 PCDHB3Q9Y5E6 796 aa10.25□□□□□ -0.77
TPM1-210ENST00000558264 CCDC160A6NGH7 325 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 H3BM21 787 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 EIF3FO00303 357 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 SAP18O00422 153 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 KPNA5O15131 536 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ACOX3O15254 700 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 HOXC11O43248 304 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 PSIP1O75475 530 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 IL6P05231 212 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 AMD1P17707 334 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 AP1S2P56377 157 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 IRX1P78414 480 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 CNPY1Q3B7I2 92 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ZIK1Q3SY52 487 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 AASDHQ4L235 1098 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 CATSPEREQ5SY80 951 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 THEMIS2Q5TEJ8 643 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 PDE12Q6L8Q7 609 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 NOXRED1Q6NXP6 359 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 TRMT11Q7Z4G4 463 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 TMPRSS11BQ86T26 416 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 CARM1Q86X55 608 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 SYT12Q8IV01 421 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 SYTL1Q8IYJ3 562 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 CLEC4FQ8N1N0 589 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 PLA2G15Q8NCC3 412 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 FBXL8Q96CD0 374 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 NUS1Q96E22 293 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 SERHLQ9NQF3 203 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 DKK3Q9UBP4 350 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ADGRE2Q9UHX3 823 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 MAGEL2Q9UJ55 1249 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ATG2BQ96BY7 2078 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 SLC5A10A0PJK1 596 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 DYTNA2CJ06 578 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 MAGEB17A8MXT2 336 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 C5orf67F2Z3F1 127 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 RFXAPO00287 272 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 AP2A2O94973 939 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 LDLRP01130 860 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 PRNPP04156 253 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ASLP04424 464 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 EPHX1P07099 455 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ANXA6P08133 673 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 PIM1P11309 404 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 ADRB3P13945 408 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 JUPP14923 745 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 GGT1P19440 569 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 IL12RB1P42701 662 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 NFE2L1Q14494 772 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 HNRNPA1L2Q32P51 320 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 NADK2Q4G0N4 442 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ANKRD34AQ69YU3 496 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 TANGO2Q6ICL3 276 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 HS3ST5Q8IZT8 346 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ZNF548Q8NEK5 533 aaPredicted RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 OR8D1Q8WZ84 308 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 FAM162AQ96A26 154 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 COQ10AQ96MF6 247 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 IL17FQ96PD4 163 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 FAM129BQ96TA1 746 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 PAIP1Q9H074 479 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 SGK2Q9HBY8 427 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 ATXN10Q9UBB4 475 aa10.24□□□□□ -0.77
TPM1-210ENST00000558264 CFAP20Q9Y6A4 193 aaKnown RBP10.24□□□□□ -0.77
TPM1-210ENST00000558264 SNAP29O95721 258 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 NPPAP01160 153 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 CATP04040 527 aaKnown RBP10.23□□□□□ -0.77
TPM1-210ENST00000558264 CLDN8P56748 225 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 ATP6AP1Q15904 470 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 METTL2BQ6P1Q9 378 aaKnown RBP10.23□□□□□ -0.77
TPM1-210ENST00000558264 PROSER1Q86XN7 944 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 CLECL1Q8IZS7 167 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 OR8J3Q8NGG0 315 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 PHOSPHO2Q8TCD6 241 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 SMARCD2Q92925 531 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 NEIL2Q969S2 332 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 TIFAQ96CG3 184 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 NMD3Q96D46 503 aaKnown RBP10.23□□□□□ -0.77
TPM1-210ENST00000558264 CMTM7Q96FZ5 175 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 TRAPPC9Q96Q05 1148 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 ADI1Q9BV57 179 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 LTB4R2Q9NPC1 389 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
TPM1-210ENST00000558264 PRR23AA6NEV1 266 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 NPC1O15118 1278 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 AXIN1O15169 862 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 SLC16A5O15375 505 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 AP1G1O43747 822 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 GMNNO75496 209 aa10.23□□□□□ -0.77
TPM1-210ENST00000558264 CPSF4O95639 269 aaKnown RBP10.23□□□□□ -0.77
TPM1-210ENST00000558264 NFATC1O95644 943 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms