RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KIFC1Q9BW19 673 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 FAM114A2Q9NRY5 505 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 SEMA3GQ9NS98 782 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 SLC22A11Q9NSA0 550 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 FBXL4Q9UKA2 621 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 KLK4Q9Y5K2 254 aa13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 SPTBN1Q01082 2364 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 SPTAN1Q13813 2472 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-204ENST00000558020 CCDC88CQ9P219 2028 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ANKRD12Q6UB98 2062 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 MAGEB16A2A368 324 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 FITM1A5D6W6 292 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ZNF839A8K0R7 811 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 PRICKLE3O43900 615 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 PHF2O75151 1096 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CNOT3O75175 753 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 FGGP02679 453 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CCDC175P0C221 793 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ERVK-10P10266 1014 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 NMBRP28336 390 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ATP5DP30049 168 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CMPK1P30085 196 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 FMO4P31512 558 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 HSD17B2P37059 387 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 GCGRP47871 477 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 GLRBP48167 497 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CARSP49589 748 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ADARP55265 1226 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 VSX2P58304 361 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 RBBP7Q16576 425 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ANKRD20A4Q4UJ75 823 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 PRR30Q53SZ7 412 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 LRRC8BQ6P9F7 803 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CNSTQ6PJW8 725 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 GAS2L3Q86XJ1 694 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 OR2L3Q8NG85 312 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ZNF285Q96NJ3 590 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 MIPEPQ99797 713 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ZNF304Q9HCX3 659 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ASF1BQ9NVP2 202 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 SPATA7Q9P0W8 599 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 SAMD15Q9P1V8 674 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 ZC3H7BQ9UGR2 993 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 CDC14AQ9UNH5 594 aa13.03□□□□□ -0.32
SNRPA1-204ENST00000558020 E5RI56 91 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 PRPF4O43172 522 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 SEMA7AO75326 666 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 VPS26AO75436 327 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 MATN4O95460 622 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 CBX6O95503 412 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 EIF2S1P05198 315 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 PKMP14618 531 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 TPSB2P20231 275 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 MGAT1P26572 445 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 OR1D4P47884 311 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 MRPL49Q13405 166 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 ARHGAP19Q14CB8 494 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 NR6A1Q15406 480 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 TPSAB1Q15661 275 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 MUM1Q2TAK8 710 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 TUBB8Q3ZCM7 444 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 CASC4Q6P4E1 433 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF662Q6ZS27 426 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 Q6ZS92 163 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 TRIM58Q8NG06 486 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 OR2A1Q8NGT9 310 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 SMPDL3AQ92484 453 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 C19orf60Q96EN9 201 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 MFSD3Q96ES6 412 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 BIRC8Q96P09 236 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 WDR77Q9BQA1 342 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 LHPPQ9H008 270 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 EPS8L2Q9H6S3 715 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 SLC6A20Q9NP91 592 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 LZTFL1Q9NQ48 299 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 ZNF282Q9UDV7 671 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 NFS1Q9Y697 457 aa13.02□□□□□ -0.33
SNRPA1-204ENST00000558020 ANKUB1A6NFN9 424 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 NRDCO43847 1150 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 CEP104O60308 925 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 CTSVO60911 334 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 CATP04040 527 aaKnown RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 MCM3P25205 808 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 RPA3P35244 121 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 EMP3P54852 163 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SIX1Q15475 284 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 TYSND1Q2T9J0 566 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 TTLL9Q3SXZ7 439 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 NEPROQ6NW34 567 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 KIRREL2Q6UWL6 708 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 OR9A1PQ8NGU1 263 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 DNAJB14Q8TBM8 379 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 PPP4R1Q8TF05 950 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 LPGAT1Q92604 370 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 MIEF2Q96C03 454 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 LMF1Q96S06 567 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 SPSB2Q99619 263 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 ZFYVE21Q9BQ24 234 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 DPH7Q9BTV6 452 aa13.01□□□□□ -0.33
SNRPA1-204ENST00000558020 CRB3Q9BUF7 120 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms