RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FAM9CQ8IZT9 166 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 DSELQ8IZU8 1212 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PGAM4Q8N0Y7 254 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PCYOX1LQ8NBM8 494 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TMEM145Q8NBT3 493 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PPFIBP2Q8ND30 876 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 REPS1Q96D71 796 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 WDR34Q96EX3 536 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TOE1Q96GM8 510 aaKnown RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 BMFQ96LC9 184 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 C12orf66Q96MD2 445 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 HBEGFQ99075 208 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 EFCAB11Q9BUY7 163 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 C1orf50Q9BV19 199 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 RAB11FIP5Q9BXF6 653 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PCBD2Q9H0N5 130 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 EHD1Q9H4M9 534 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 MVB12BQ9H7P6 319 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 FARSBQ9NSD9 589 aaKnown RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 WSB2Q9NYS7 404 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 TDRKHQ9Y2W6 561 aaKnown RBP12.09□□□□□ -0.47
SHMT2-233ENST00000557529 NDUFAF1Q9Y375 327 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 HEBP2Q9Y5Z4 205 aa12.09□□□□□ -0.47
SHMT2-233ENST00000557529 PDZK1P1A8MUH7 402 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 NR5A2O00482 541 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 PRAMEF4O60810 478 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SEC22BO75396 215 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 IGHV4-34P06331 123 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 CD1EP15812 388 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 NPPBP16860 134 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 RPL10P27635 214 aaKnown RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 MAPK1P28482 360 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 NME5P56597 212 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 KCNK10P57789 538 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 RPL38P63173 70 aaKnown RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 HMGCS1Q01581 520 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 LAPTM5Q13571 262 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 CYP2A13Q16696 494 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 TRMT5Q32P41 509 aaKnown RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 IL23RQ5VWK5 629 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 PRAMEF9Q5VWM5 478 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 ATG9BQ674R7 924 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 REP15Q6BDI9 236 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 BLOC1S3Q6QNY0 202 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 LCTLQ6UWM7 567 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SLCO4C1Q6ZQN7 724 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 NET1Q7Z628 596 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 ABI3BPQ7Z7G0 1075 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 FUNDC1Q8IVP5 155 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 UBALD2Q8IYN6 164 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 GJD3Q8N144 294 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 OR9I1Q8NGQ6 314 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SLC5A11Q8WWX8 675 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 OR1E3Q8WZA6 343 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SMPDL3AQ92484 453 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 CMTM7Q96FZ5 175 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 HHIPQ96QV1 700 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 FERD3LQ96RJ6 166 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 INSM2Q96T92 566 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SERPINI1Q99574 410 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 NPAS2Q99743 824 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 ACPTQ9BZG2 426 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 C6orf106Q9H6K1 298 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 WDR41Q9HAD4 459 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 MRPL40Q9NQ50 206 aaKnown RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 CA5BQ9Y2D0 317 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 TMED5Q9Y3A6 229 aa12.08□□□□□ -0.48
SHMT2-233ENST00000557529 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.08□□□□□ -0.48
SHMT2-233ENST00000557529 A0A088AWK7 358 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 FAM234BA2RU67 622 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 FBP2O00757 339 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 MRASO14807 208 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 ANGPT2O15123 496 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 ATP6V1G2O95670 118 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 C1GALT1C1LP0DN25 315 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 ACPPP15309 386 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PRKG2Q13237 762 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 TSTA3Q13630 321 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 RCAN2Q14206 197 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 GAS6Q14393 721 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 KRT33BQ14525 404 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 SNCBQ16143 134 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 HIST2H2ACQ16777 129 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 RFTN2Q52LD8 501 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PRAMEF14Q5SWL7 426 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 THEMIS2Q5TEJ8 643 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PRAMEF13Q5VWM6 474 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 HIST2H2AA3Q6FI13 130 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 MED27Q6P2C8 311 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 PGM2L1Q6PCE3 622 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 CYP20A1Q6UW02 462 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 WASH2PQ6VEQ5 465 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 BNC2Q6ZN30 1099 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-233ENST00000557529 Q6ZSR6 202 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 TMPRSS11BQ86T26 416 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 SIX5Q8N196 739 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 SPEM1Q8N4L4 309 aa12.07□□□□□ -0.48
SHMT2-233ENST00000557529 WDR20Q8TBZ3 569 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms