RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 TUBA1CQ9BQE3 449 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 REXO4Q9GZR2 422 aaKnown RBP17.23■□□□□ 0.35
XRCC3-218ENST00000557439 ZDHHC3Q9NYG2 299 aa17.23■□□□□ 0.35
XRCC3-218ENST00000557439 TMEM202A6NGA9 273 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 TRIM64BA6NI03 449 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 C16orf96A6NNT2 1141 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 FAM220BPB1ANY3 271 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 YY2O15391 372 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 C1SP09871 688 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 AOAHP28039 575 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 GSTM2P28161 218 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 ATG9BQ674R7 924 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 LMNTD1Q8N9Z9 388 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 SMYD1Q8NB12 490 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 FKBP10Q96AY3 582 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 SH3GL1Q99961 368 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 RDH14Q9HBH5 336 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 BAG5Q9UL15 447 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 A0A096LPI6 279 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 OR2AG2A6NM03 316 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 CPSF4O95639 269 aaKnown RBP17.22■□□□□ 0.35
XRCC3-218ENST00000557439 HOXB9P17482 250 aaPredicted RBP17.22■□□□□ 0.35
XRCC3-218ENST00000557439 CD22P20273 847 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 HLA-FP30511 346 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 EPHB3P54753 998 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 TMBIM6P55061 237 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 GP2P55259 537 aaKnown RBP17.22■□□□□ 0.35
XRCC3-218ENST00000557439 POM121L1PQ3SYA9 428 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 GPR33Q49SQ1 333 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 LRIF1Q5T3J3 769 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 C16orf87Q6PH81 154 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 DPY19L3Q6ZPD9 716 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 SLC16A12Q6ZSM3 486 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 CYP2U1Q7Z449 544 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 SNX29P2Q8IUI4 249 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 SVOPLQ8N434 492 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 TMEM169Q96HH4 297 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 THG1LQ9NWX6 298 aaKnown RBP17.22■□□□□ 0.35
XRCC3-218ENST00000557439 USE1Q9NZ43 259 aa17.22■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF106Q9H2Y7 1883 aaKnown RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 BCKDKO14874 412 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 BCAS1O75363 584 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ERN1O75460 977 aaKnown RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 RETP07949 1114 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 GSSP48637 474 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CCR3P51677 355 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF829Q3KNS6 432 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF691Q5VV52 312 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CPZQ66K79 652 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ASTLQ6HA08 431 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CRTC3Q6UUV7 619 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ZNF621Q6ZSS3 439 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 TPRG1Q6ZUI0 275 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CROCCP3Q8IVE0 287 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 LILRA3Q8N6C8 439 aaPredicted RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 SLC29A3Q9BZD2 475 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 TBC1D23Q9NUY8 699 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ERVK-18Q9QC07 812 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 B4GALT6Q9UBX8 382 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 C3orf18Q9UK00 162 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 PSME2Q9UL46 239 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 BTBD3Q9Y2F9 522 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 SH3BP1Q9Y3L3 701 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 OBSL1O75147 1896 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 A0A1W2PRU2 124 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 SOCS5O75159 536 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 AQP1P29972 269 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 DAPP51397 102 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 VLDLRP98155 873 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CHIT1Q13231 466 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CDK5R2Q13319 367 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CCSMST1Q4G0I0 132 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 Q6ZVU0 165 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 BORCS5Q969J3 196 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 SCRN2Q96FV2 425 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 SUV39H2Q9H5I1 410 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 ARMC7Q9H6L4 198 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 PCDH12Q9NPG4 1184 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 MRPL17Q9NRX2 175 aaKnown RBP17.21■□□□□ 0.35
XRCC3-218ENST00000557439 CCL26Q9Y258 94 aa17.21■□□□□ 0.35
XRCC3-218ENST00000557439 AGAP14A8MT82 685 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 NUDT7P0C024 238 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 ENGP17813 658 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 IGFBP5P24593 272 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 TPGS2Q68CL5 300 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 NOXRED1Q6NXP6 359 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 CCDC81Q6ZN84 652 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 PANX1Q96RD7 426 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 NODALQ96S42 347 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 AASDHPPTQ9NRN7 309 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 FAIMQ9NVQ4 179 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 ASIC5Q9NY37 505 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 GMEB1Q9Y692 573 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 MYO7AQ13402 2215 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 TEX28O15482 410 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 ALDH1A1P00352 501 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 AMD1P17707 334 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 PCMT1P22061 227 aa17.2■□□□□ 0.34
XRCC3-218ENST00000557439 EMX1Q04741 257 aaPredicted RBP17.2■□□□□ 0.34
XRCC3-218ENST00000557439 UGT8Q16880 541 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms