RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 SIRT6Q8N6T7 355 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 OR6P1Q8NGX9 317 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 OR2L8Q8NGY9 312 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 STT3BQ8TCJ2 826 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 PPP1R2P1Q96PQ5 205 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 TAAR6Q96RI8 345 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 SLX1AQ9BQ83 275 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 WDR54Q9H977 334 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 PTGFRNQ9P2B2 879 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 ZC3H7BQ9UGR2 993 aaKnown RBP13.46□□□□□ -0.25
SLIRP-210ENST00000557431 SH3BGRL2Q9UJC5 107 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 SLC39A10Q9ULF5 831 aa13.46□□□□□ -0.25
SLIRP-210ENST00000557431 VSTM2BA6NLU5 285 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 RASGRF2O14827 1237 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 HNRNPRO43390 633 aaKnown RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 GPC4O75487 556 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 FTCDO95954 541 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 S1PR4O95977 384 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 ALBP02768 609 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 PSMA3P25788 255 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 ST13P50502 369 aaKnown RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 TDGF1P3P51864 188 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 PER3P56645 1201 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 MFAP5Q13361 173 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 FASTKQ14296 549 aaKnown RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 GRM7Q14831 915 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 TLR1Q15399 786 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 DNAJC21Q5F1R6 531 aaKnown RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 B3GNTL1Q67FW5 361 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 PPP1R21Q6ZMI0 780 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 MCEMP1Q8IX19 187 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 SHISA5Q8N114 240 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 LRRC57Q8N9N7 239 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 OR4L1Q8NH43 312 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 SLC35B2Q8TB61 432 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 BRIX1Q8TDN6 353 aaKnown RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 DENND1AQ8TEH3 1009 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 C10orf90Q96M02 699 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 ZNF285Q96NJ3 590 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 SLC26A1Q9H2B4 701 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 ETNK1Q9HBU6 452 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 OLAHQ9NV23 265 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 C3orf18Q9UK00 162 aa13.45□□□□□ -0.26
SLIRP-210ENST00000557431 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
SLIRP-210ENST00000557431 F8P00451 2351 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 HYKKA2RU49 373 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 MAP2K7O14733 419 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 KDM1AO60341 852 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 WISP2O76076 250 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ONECUT2O95948 504 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ZGLP1P0C6A0 271 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 PIM1P11309 404 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ACPPP15309 386 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 CETN2P41208 172 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ARG2P78540 354 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 PMP22Q01453 160 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 CDH17Q12864 832 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 KLF1Q13351 362 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 P3H1Q32P28 736 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 FASTKD1Q53R41 847 aaKnown RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ZC3H12BQ5HYM0 836 aaKnown RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 CNSTQ6PJW8 725 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 RAD9BQ6WBX8 426 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 CCDC170Q8IYT3 715 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 SKA2Q8WVK7 121 aaPredicted RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 PSMF1Q92530 271 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 FAM136AQ96C01 138 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 MIEF2Q96C03 454 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 PHF12Q96QT6 1004 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 YIPF2Q9BWQ6 316 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 TRIM5Q9C035 493 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 MRM3Q9HC36 420 aaKnown RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ZNF304Q9HCX3 659 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 LUC7LQ9NQ29 371 aaKnown RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 SEMA3GQ9NS98 782 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 INTS7Q9NVH2 962 aaKnown RBP13.44□□□□□ -0.26
SLIRP-210ENST00000557431 ENTPD4Q9Y227 616 aa13.44□□□□□ -0.26
SLIRP-210ENST00000557431 A0A1W2PPV9 198 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 HEATR9A2RTY3 570 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 FITM1A5D6W6 292 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 GOLGA6L9A6NEM1 432 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 HPP00738 406 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 IFNB1P01574 187 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 STATHP02808 62 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 APOA4P06727 396 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 F7P08709 466 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-210ENST00000557431 STSP08842 583 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 COX6A1P12074 109 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 FBLP22087 321 aaKnown RBP13.43□□□□□ -0.26
SLIRP-210ENST00000557431 AOAHP28039 575 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 EFNA3P52797 238 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 SNRPNP63162 240 aaKnown RBP13.43□□□□□ -0.26
SLIRP-210ENST00000557431 PRAMEP78395 509 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 CRADDP78560 199 aa13.43□□□□□ -0.26
SLIRP-210ENST00000557431 PLOD1Q02809 727 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-210ENST00000557431 NAA30Q147X3 362 aaPredicted RBP13.43□□□□□ -0.26
SLIRP-210ENST00000557431 SYT16Q17RD7 645 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms