RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 TAOK1Q7L7X3 1001 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 CMC1Q7Z7K0 106 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 ADAMTSL2Q86TH1 951 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 FAM20CQ8IXL6 584 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 PPFIBP2Q8ND30 876 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 OR2L3Q8NG85 312 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 OR2A1Q8NGT9 310 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 OR8K5Q8NH50 307 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 SLC44A1Q8WWI5 657 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 N4BP2L2Q92802 583 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-228ENST00000557302 PAFAH2Q99487 392 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 MIPEPQ99797 713 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 ACAT2Q9BWD1 397 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 TXLNGYQ9BZA5 131 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 DPH1Q9BZG8 443 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 DERL2Q9GZP9 239 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 ARL15Q9NXU5 204 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 STOX2Q9P2F5 926 aaPredicted RBP13.09□□□□□ -0.31
SHMT2-228ENST00000557302 CTNNAL1Q9UBT7 734 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 NOVA2Q9UNW9 492 aaKnown RBP13.09□□□□□ -0.31
SHMT2-228ENST00000557302 KLHL20Q9Y2M5 609 aa13.09□□□□□ -0.31
SHMT2-228ENST00000557302 LAMA5O15230 3695 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 A0A087WV48 116 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 EXOC1LA0A1B0GW35 172 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 TMEM150CB9EJG8 249 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 POC1B-GALNT4F8VUJ3 575 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 CDC7O00311 574 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 STK17BO94768 372 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 CCNDBP1O95273 360 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 MSL3P1P0C860 447 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 CCDC166P0CW27 439 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 CMPK1P30085 196 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 MSH2P43246 934 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 SERPINB9P50453 376 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 ATP6V0D1P61421 351 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 NAA25Q14CX7 972 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 THEMIS2Q5TEJ8 643 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 KIAA1614Q5VZ46 1190 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 SBSNQ6UWP8 590 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 MBOAT1Q6ZNC8 495 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 FRA10AC1Q70Z53 315 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 LRRC56Q8IYG6 542 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 ATL1Q8WXF7 558 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 ZNF501Q96CX3 271 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 FCRL4Q96PJ5 515 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 ULBP3Q9BZM4 244 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 UNKQ9C0B0 810 aaKnown RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 FAM60AQ9NP50 221 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 CCDC177Q9NQR7 707 aaPredicted RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 UTP6Q9NYH9 597 aaKnown RBP13.08□□□□□ -0.32
SHMT2-228ENST00000557302 TAC3Q9UHF0 121 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 IKZF3Q9UKT9 509 aa13.08□□□□□ -0.32
SHMT2-228ENST00000557302 HMX2A2RU54 273 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TARM1B6A8C7 271 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 KLK10O43240 276 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 RAD1O60671 282 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 KRT38O76015 456 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 GUCA1CO95843 209 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 CD1DP15813 335 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 GRIA3P42263 894 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SERPINB8P50452 374 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 ATP1A2P50993 1020 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TBPL1P62380 186 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 ABATP80404 500 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 CLN3Q13286 438 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 CSHL1Q14406 222 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TSNQ15631 228 aaKnown RBP13.07□□□□□ -0.32
SHMT2-228ENST00000557302 PPP1R3AQ16821 1122 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 DEFB110Q30KQ9 67 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TAF1BQ53T94 588 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-228ENST00000557302 ICE2Q659A1 982 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 PWWP2BQ6NUJ5 590 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 FIGLAQ6QHK4 219 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 CCDC91Q7Z6B0 441 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TBC1D1Q86TI0 1168 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-228ENST00000557302 DTX1Q86Y01 620 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TMEM126BQ8IUX1 230 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SPACA3Q8IXA5 215 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SPATA6LQ8N4H0 392 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 OR1L3Q8NH93 324 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 ZUFSPQ96AP4 578 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 FBXL8Q96CD0 374 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 UBXN10Q96LJ8 280 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 PCBD2Q9H0N5 130 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 ATG10Q9H0Y0 220 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 MRPS30Q9NP92 439 aaKnown RBP13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SNX15Q9NRS6 342 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 WDR70Q9NW82 654 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 SERTAD3Q9UJW9 196 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 PILRAQ9UKJ1 303 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 TMEM184BQ9Y519 407 aaPredicted RBP13.07□□□□□ -0.32
SHMT2-228ENST00000557302 KLK4Q9Y5K2 254 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 PKD1L2Q7Z442 2459 aa13.07□□□□□ -0.32
SHMT2-228ENST00000557302 LOC400499M0QZD8 3231 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 ADAMTS20P59510 1910 aa13.06□□□□□ -0.32
SHMT2-228ENST00000557302 SCRG1O75711 98 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms