RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 MAGEA12P43365 314 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 SLCO1A2P46721 670 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 AP1S2P56377 157 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ATP6V0D1P61421 351 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 MC2RQ01718 297 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 TUBB3Q13509 450 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 GPR19Q15760 415 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ZIC1Q15915 447 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ZXDCQ2QGD7 858 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-225ENST00000556798 DEFB110Q30KQ9 67 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 IGF2-ASQ6U949 168 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 LSMEM2Q8N112 164 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 D2HGDHQ8N465 521 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 OR2L3Q8NG85 312 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 OR2A1Q8NGT9 310 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 OR2W6PQ8NHA6 318 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 EPS8L3Q8TE67 593 aaKnown RBP16.85■□□□□ 0.29
SHMT2-225ENST00000556798 EXT2Q93063 718 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ISL2Q96A47 359 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 NXNL1Q96CM4 212 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 MED8Q96G25 268 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 TAAR9Q96RI9 348 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 EGFL8Q99944 293 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 CCDC77Q9BR77 488 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ALG9Q9H6U8 611 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 PSMC3IPQ9P2W1 217 aaPredicted RBP16.85■□□□□ 0.29
SHMT2-225ENST00000556798 FETUBQ9UGM5 382 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 TBK1Q9UHD2 729 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 OARD1Q9Y530 152 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 PCDHB11Q9Y5F2 797 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 B3GALT1Q9Y5Z6 326 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 ACACAQ13085 2346 aa16.85■□□□□ 0.29
SHMT2-225ENST00000556798 TPRP12270 2363 aaKnown RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 ACACBO00763 2458 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 MAP1BP46821 2468 aaKnown RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 POLR1CO15160 346 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 NRP2O60462 931 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 CAPNS1P04632 268 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 TFEBP19484 476 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 SLC5A2P31639 672 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 GLRBP48167 497 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 NAE1Q13564 534 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 TBC1D25Q3MII6 688 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 TMTC4Q5T4D3 741 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 THEMIS2Q5TEJ8 643 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 CDHR3Q6ZTQ4 885 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 PLD6Q8N2A8 252 aaKnown RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 ZCCHC14Q8WYQ9 949 aaKnown RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 PYCR2Q96C36 320 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 FAM60AQ9NP50 221 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 PDE7BQ9NP56 450 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 SLC6A20Q9NP91 592 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 CCDC177Q9NQR7 707 aaPredicted RBP16.84■□□□□ 0.29
SHMT2-225ENST00000556798 FBXO8Q9NRD0 319 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 THSD1Q9NS62 852 aa16.84■□□□□ 0.29
SHMT2-225ENST00000556798 IQANK1A0A1B0GTG1 560 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 HCRTR1O43613 425 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 TLX3O43711 291 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-225ENST00000556798 RAB15P59190 212 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 TGFBIQ15582 683 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 C18orf21Q32NC0 220 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-225ENST00000556798 DCAF12Q5T6F0 453 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 LGSNQ5TDP6 509 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 PRAMEF13Q5VWM6 474 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 ICE2Q659A1 982 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 FCRL6Q6DN72 434 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 CCDC91Q7Z6B0 441 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 CLEC14AQ86T13 490 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 KIAA1191Q96A73 305 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 FBXL8Q96CD0 374 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 ZNF578Q96N58 590 aaPredicted RBP16.83■□□□□ 0.28
SHMT2-225ENST00000556798 DDA1Q9BW61 102 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 NMRAL1Q9HBL8 299 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 FGF21Q9NSA1 209 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 RNF112Q9ULX5 631 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 SH2B3Q9UQQ2 575 aa16.83■□□□□ 0.28
SHMT2-225ENST00000556798 AHCTF1Q8WYP5 2266 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 FOXO6A8MYZ6 492 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 MAP3K7O43318 606 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 RFPL1O75677 317 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 KLHL2O95198 593 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 ANXA5P08758 320 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 CMPK1P30085 196 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 SLC26A3P40879 764 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 GRIA3P42263 894 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 KCNC1P48547 511 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 ERVPABLB-1P60509 514 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 CDKL1Q00532 357 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 ACY1Q03154 408 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 TMEM164Q5U3C3 297 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 FIGLAQ6QHK4 219 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 CEACAM20Q6UY09 585 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 ISCA2Q86U28 154 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 GPSM1Q86YR5 675 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 MTBPQ96DY7 904 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 TCTN2Q96GX1 697 aa16.82■□□□□ 0.28
SHMT2-225ENST00000556798 CNTNAP3BQ96NU0 1288 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms