RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 ALKAL1Q6UXT8 129 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GALNT7Q86SF2 657 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CAMK1DQ8IU85 385 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 HERC6Q8IVU3 1022 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GLB1L2Q8IW92 636 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 DENND6AQ8IWF6 608 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 AQP12AQ8IXF9 295 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RNF168Q8IYW5 571 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CENPLQ8N0S6 344 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SCML4Q8N228 414 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PELI3Q8N2H9 469 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PCDH20Q8N6Y1 951 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RNF148Q8N7C7 305 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 RTL3Q8N8U3 475 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6V0D2Q8N8Y2 350 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ANKFN1Q8N957 763 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 DRAXINQ8NBI3 349 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SPATA22Q8NHS9 363 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 HEXDCQ8WVB3 486 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ATP6V1E2Q96A05 226 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PPP1R14BQ96C90 147 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PCED1BQ96HM7 432 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ZNF597Q96LX8 424 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 KLHL32Q96NJ5 620 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 FAM193BQ96PV7 902 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 PPP1R10Q96QC0 940 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 IL12RB2Q99665 862 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SMOQ99835 787 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TRIM54Q9BYV2 358 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SLC25A51Q9H1U9 297 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SMOC2Q9H3U7 446 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 POFUT1Q9H488 388 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 CLK4Q9HAZ1 481 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 POPDC3Q9HBV1 291 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 WDR6Q9NNW5 1121 aaKnown RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ANLNQ9NQW6 1124 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 STARD7Q9NQZ5 370 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 VPS45Q9NRW7 570 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 ABCC13Q9NSE7 274 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TBC1D23Q9NUY8 699 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TUBA8Q9NY65 449 aaPredicted RBP4.33□□□□□ -1.72
ATXN3-241ENST00000556374 NCDNQ9UBB6 729 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 DKK2Q9UBU2 259 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 SARDHQ9UL12 918 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 AURKCQ9UQB9 309 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 TBC1D30Q9Y2I9 924 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 NDUFAF1Q9Y375 327 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 GMEB1Q9Y692 573 aa4.33□□□□□ -1.72
ATXN3-241ENST00000556374 FNDC1Q4ZHG4 1894 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 PCSK5Q92824 1860 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 ANKRD11Q6UB99 2663 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 SPTBN2O15020 2390 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 DMXL1Q9Y485 3027 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 A0A0J9YYE9 177 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 RNF103-CHMP3A0A140T963 221 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 PABPN1LA6NDY0 278 aaKnown RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CASTOR2A6NHX0 329 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CCDC154A6NI56 674 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 SAC3D1A6NKF1 404 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 TMEM233B4DJY2 109 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 B5MCH6 92 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 E7ENX8 843 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 E9PAM4 449 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 FAM72CH0Y354 149 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 STX16-NPEPL1H3BU86 382 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 AZIN1O14977 448 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 SLC7A4O43246 635 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CACNG3O60359 315 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 SNAP91O60641 907 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 KPNA6O60684 536 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 SNX2O60749 519 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 FAM20BO75063 409 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 TRMUO75648 421 aaKnown RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 BEST1O76090 585 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CSPG5O95196 566 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 MLYCDO95822 493 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 GLP2RO95838 553 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 MT-CYBP00156 380 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 AHSGP02765 367 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 FGF1P05230 155 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 PYGLP06737 847 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 F7P08709 466 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 LBPP18428 481 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 HLA-DPA1P20036 260 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 OGNP20774 298 aaKnown RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 HMOX2P30519 316 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 HOXA11P31270 313 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 HOXC13P31276 330 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 ARRB2P32121 409 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CD86P42081 329 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 GRIA3P42263 894 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CCR10P46092 362 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 PSMD8P48556 350 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 NDUFV1P49821 464 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CDK9P50750 372 aaKnown RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 CLCNKBP51801 687 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 KPNA1P52294 538 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-241ENST00000556374 NDST2P52849 883 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 PLK1P53350 603 aa4.32□□□□□ -1.72
ATXN3-241ENST00000556374 HERVK_113P63132 956 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms