RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 EHD1Q9H4M9 534 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 ABCF3Q9NUQ8 709 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 UCKL1Q9NWZ5 548 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 NCDNQ9UBB6 729 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 PLAGL1Q9UM63 463 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 SNX6Q9UNH7 406 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 ICKQ9UPZ9 632 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 APOBEC2Q9Y235 224 aaKnown RBP8.92□□□□□ -0.98
ACTN1-218ENST00000556343 TRAF6Q9Y4K3 522 aa8.92□□□□□ -0.98
ACTN1-218ENST00000556343 KNL1Q8NG31 2342 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PIPSLA2A3N6 862 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 OR6C74A6NCV1 312 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PATE3B3GLJ2 98 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 AZIN1O14977 448 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 ITM2AO43736 263 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 NOBOXO60393 691 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 UBXN7O94888 489 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 KRT6AP02538 564 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 KRT6BP04259 564 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CHRM5P08912 532 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PNLIPP16233 465 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 NPPBP16860 134 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 GPR3P46089 330 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 KRT6CP48668 564 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CCR8P51685 355 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 MAZP56270 477 aaKnown RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 ZNF33BQ06732 778 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PRDX1Q06830 199 aaKnown RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PCDH1Q08174 1060 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 IFT88Q13099 833 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CHIT1Q13231 466 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SLC14A1Q13336 389 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 GPR18Q14330 331 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 GRB7Q14451 532 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SF1Q15637 639 aaKnown RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 TBCCQ15814 346 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 C18orf21Q32NC0 220 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 FBXO48Q5FWF7 155 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SH2D4BQ5SQS7 431 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 C10orf62Q5T681 223 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 ATG9BQ674R7 924 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 NXPE4Q6UWF7 544 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SUSD1Q6UWL2 747 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 C17orf82Q86X59 251 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 MYLK4Q86YV6 388 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 MINDY1Q8N5J2 469 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PPFIBP2Q8ND30 876 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 OR10G6Q8NH81 332 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 AGAP11Q8TF27 550 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SLC5A11Q8WWX8 675 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 NAT6Q93015 286 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 IL17FQ96PD4 163 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 AIF1LQ9BQI0 150 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PLCD4Q9BRC7 762 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PITHD1Q9GZP4 211 aaPredicted RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 FAM107BQ9H098 131 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 XKR8Q9H6D3 395 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PELI2Q9HAT8 420 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 MRPS30Q9NP92 439 aaKnown RBP8.91□□□□□ -0.98
ACTN1-218ENST00000556343 FGFR1OP2Q9NVK5 253 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 NMRK1Q9NWW6 199 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 HRASLS2Q9NWW9 162 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 KCNK4Q9NYG8 393 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 LRIT1Q9P2V4 623 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CIDEBQ9UHD4 219 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 TRPS1Q9UHF7 1281 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 ADGRE2Q9UHX3 823 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 HAO1Q9UJM8 370 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 PADI4Q9UM07 663 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 SNX7Q9UNH6 387 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 MUC3AQ02505 3323 aa8.91□□□□□ -0.98
ACTN1-218ENST00000556343 CEP192Q8TEP8 1941 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 GSAPA4D1B5 854 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 OR5K3A6NET4 321 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 LRRC14BA6NHZ5 514 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 HDAC3O15379 428 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 FLRT2O43155 660 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 VPS4BO75351 444 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 ULK1O75385 1050 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 LYPLA1O75608 230 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-218ENST00000556343 FAM107AO95990 144 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 PROS1P07225 676 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 C1GALT1C1LP0DN25 315 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 KITP10721 976 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 TSPAN8P19075 237 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 POLR2CP19387 275 aaPredicted RBP8.9□□□□□ -0.98
ACTN1-218ENST00000556343 MPSTP25325 297 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 SERPINB1P30740 379 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 CASP2P42575 452 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 GRK6P43250 576 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 SEC24CP53992 1094 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 SH3BP2P78314 561 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 GPLD1P80108 840 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 DAB2P98082 770 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 TCF15Q12870 199 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 FASTKQ14296 549 aaKnown RBP8.9□□□□□ -0.98
ACTN1-218ENST00000556343 SHBQ15464 509 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 SLC5A12Q1EHB4 618 aa8.9□□□□□ -0.98
ACTN1-218ENST00000556343 GGTA1PQ4G0N0 100 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms