RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 MCM3P25205 808 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 RORAP35398 523 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 HSD17B2P37059 387 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 SKIV2L2P42285 1042 aaKnown RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 RGS4P49798 205 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 TIAL1Q01085 375 aaKnown RBP eCLIP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 CAV1Q03135 178 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 CDC20Q12834 499 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 GPS2Q13227 327 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 DNASE1L3Q13609 305 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 SF1Q15637 639 aaKnown RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 DEFB110Q30KQ9 67 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 CRTC2Q53ET0 693 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 TAF1BQ53T94 588 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 ZNF517Q6ZMY9 492 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 PIWIL4Q7Z3Z4 852 aaKnown RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 FAM20CQ8IXL6 584 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 GPR135Q8IZ08 494 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 CT55Q8WUE5 264 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 ASB11Q8WXH4 323 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 N4BP2L2Q92802 583 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 ACTR5Q9H9F9 607 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 MOCS1Q9NZB8 636 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.1□□□□□ -0.63
SLIRP-205ENST00000556310 KCND3Q9UK17 655 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 PCDHGA6Q9Y5G7 932 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 KLK4Q9Y5K2 254 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 ANKRD12Q6UB98 2062 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 COL6A6A6NMZ7 2263 aa11.1□□□□□ -0.63
SLIRP-205ENST00000556310 A0A1W2PPV9 198 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 H3BMH7 237 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 GFYI3L273 518 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 KIF2AO00139 706 aaPredicted RBP11.09□□□□□ -0.63
SLIRP-205ENST00000556310 HCRTR1O43613 425 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 OR2B3O76000 313 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 HBQ1P09105 142 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 TCN2P20062 427 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 FDXRP22570 491 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PSMB5P28074 263 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 CDKN2DP55273 166 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 CYP4F2P78329 520 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SP140Q13342 867 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 FASTKQ14296 549 aaKnown RBP11.09□□□□□ -0.63
SLIRP-205ENST00000556310 NAA25Q14CX7 972 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PRAMEF17Q5VTA0 474 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 FAM45BPQ6NSW5 357 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 C8orf74Q6P047 294 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 CYHR1Q6ZMK1 362 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SLC26A11Q86WA9 606 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 DSELQ8IZU8 1212 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 DNAJC22Q8N4W6 341 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 GPATCH11Q8N954 259 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SLC38A9Q8NBW4 561 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 OR2L3Q8NG85 312 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 OR2A1Q8NGT9 310 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 FAM45AQ8TCE6 357 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PYROXD1Q8WU10 500 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SMPDL3AQ92484 453 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 CLIP3Q96DZ5 547 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 CATSPER2Q96P56 530 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PKP4Q99569 1192 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SAYSD1Q9NPB0 183 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PCMTD2Q9NV79 361 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 NSMCE4AQ9NXX6 385 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SRPK3Q9UPE1 567 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PLCL2Q9UPR0 1127 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 PSAT1Q9Y617 370 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 MRPS18BQ9Y676 258 aaKnown RBP11.09□□□□□ -0.63
SLIRP-205ENST00000556310 AP1M2Q9Y6Q5 423 aa11.09□□□□□ -0.63
SLIRP-205ENST00000556310 SPTA1P02549 2419 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 BOD1L1Q8NFC6 3051 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 TARM1B6A8C7 271 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 MEN1O00255 615 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZSCAN9O15535 394 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZNF749O43361 778 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZBTB14O43829 449 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 SLC16A8O95907 504 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 KLK3P07288 261 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 C8GP07360 202 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 PRKAR1AP10644 381 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 RPA3P35244 121 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 GRIA3P42263 894 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 PNLIPRP1P54315 467 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 PLTPP55058 493 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ILF2Q12905 390 aaKnown RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 HECTD2Q5U5R9 776 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 FCRL6Q6DN72 434 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 TLDC1Q6P9B6 456 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 FIGLAQ6QHK4 219 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 PAQR3Q6TCH7 311 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 UBE2R2Q712K3 238 aaPredicted RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 STRA8Q7Z7C7 330 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZC3HC1Q86WB0 502 aaKnown RBP11.08□□□□□ -0.64
SLIRP-205ENST00000556310 SYTL1Q8IYJ3 562 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 MYO1HQ8N1T3 1032 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 FBXO25Q8TCJ0 367 aa11.08□□□□□ -0.64
SLIRP-205ENST00000556310 ZNF480Q8WV37 535 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms