RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 GRM6O15303 877 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 CREG1O75629 220 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 CYP2A6P11509 494 aaPredicted RBP14.47□□□□□ -0.09
CUX1-215ENST00000556210 PABPC1P11940 636 aaKnown RBP14.47□□□□□ -0.09
CUX1-215ENST00000556210 TYRP14679 529 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 RFC2P35250 354 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 MAGEA10P43363 369 aaPredicted RBP14.47□□□□□ -0.09
CUX1-215ENST00000556210 BMXP51813 675 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 DUS1LQ6P1R4 473 aaKnown RBP14.47□□□□□ -0.09
CUX1-215ENST00000556210 BEND5Q7L4P6 421 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 LIMS2Q7Z4I7 341 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 CLECL1Q8IZS7 167 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 MINDY1Q8N5J2 469 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 DCAF4L2Q8NA75 395 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 CAPSLQ8WWF8 208 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 SLC32A1Q9H598 525 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 ZNF334Q9HCZ1 680 aaPredicted RBP14.47□□□□□ -0.09
CUX1-215ENST00000556210 ZIM2Q9NZV7 527 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 PSME2Q9UL46 239 aa14.47□□□□□ -0.09
CUX1-215ENST00000556210 LEFTY2O00292 366 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 BMP2P12643 396 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 PTNP21246 168 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 TACR1P25103 407 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 IL12AP29459 219 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 EEFSECP57772 596 aaKnown RBP14.46□□□□□ -0.09
CUX1-215ENST00000556210 FRG2Q64ET8 278 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 HMBOX1Q6NT76 420 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 NANOGNBQ7Z5D8 188 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 SLC15A4Q8N697 577 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 FAM86B1Q8N7N1 296 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 C12orf76Q8N812 135 aaPredicted RBP14.46□□□□□ -0.09
CUX1-215ENST00000556210 FRG2BQ96QU4 278 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 RHCGQ9UBD6 479 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 HOXC13P31276 330 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 SEPHS1P49903 392 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 CLCN2P51788 898 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 PELI3Q8N2H9 469 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 ZDHHC3Q9NYG2 299 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 DLGAP4Q9Y2H0 992 aa14.46□□□□□ -0.09
CUX1-215ENST00000556210 WASH4PA8MWX3 477 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 MAGEB17A8MXT2 336 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 SUV39H1O43463 412 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 LEFTY1O75610 366 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 SOD2P04179 222 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 PCBP2Q15366 365 aaKnown RBP eCLIP14.46□□□□□ -0.12e-6■■■■■ 33.7
CUX1-215ENST00000556210 CYP2A13Q16696 494 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 TNFAIP8L2Q6P589 184 aaPredicted RBP14.46□□□□□ -0.1
CUX1-215ENST00000556210 TPRG1Q6ZUI0 275 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 ZNF420Q8TAQ5 688 aaPredicted RBP14.46□□□□□ -0.1
CUX1-215ENST00000556210 NODALQ96S42 347 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 EPS8L2Q9H6S3 715 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 GIN1Q9NXP7 522 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 MTRRQ9UBK8 725 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 ZNF510Q9Y2H8 683 aa14.46□□□□□ -0.1
CUX1-215ENST00000556210 SLC16A1P53985 500 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CDH12P55289 794 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 DGKKQ5KSL6 1271 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 C22orf39Q6P5X5 142 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CCDC149Q6ZUS6 474 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 PAGE2Q7Z2X7 111 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 GRASPQ7Z6J2 395 aaPredicted RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 APIPQ96GX9 242 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 IMP3Q9NV31 184 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 GPC6Q9Y625 555 aaPredicted RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 OAS3Q9Y6K5 1087 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 TCRBV3S1A0A5B6 114 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 TMX2-CTNND1H3BSU7 103 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 E2F3O00716 465 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 TSPAN6O43657 245 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CLPXO76031 633 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 IL6P05231 212 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 FGF4P08620 206 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 ENO2P09104 434 aaPredicted RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 CDH1P12830 882 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 MAT2AP31153 395 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 ALDH3B2P48448 385 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 ST13P50502 369 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 NFATC3Q12968 1075 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 INAQ16352 499 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CARD16Q5EG05 197 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 ARMCX6Q7L4S7 300 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 FAM124AQ86V42 546 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CLIP4Q8N3C7 705 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 POC5Q8NA72 575 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 NACC2Q96BF6 587 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 APOL4Q9BPW4 351 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 NPLQ9BXD5 320 aaPredicted RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 WDR37Q9Y2I8 494 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 TTC34A8MYJ7 566 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 TLL1O43897 1013 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 FGF18O76093 207 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 RPS17P08708 135 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 SYN1P17600 705 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 MYF6P23409 242 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 PLA2G16P53816 162 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 CRTC1Q6UUV9 634 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 LEMD2Q8NC56 503 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 ZUFSPQ96AP4 578 aa14.45□□□□□ -0.1
CUX1-215ENST00000556210 PAWRQ96IZ0 340 aaKnown RBP14.45□□□□□ -0.1
CUX1-215ENST00000556210 MAELQ96JY0 434 aaKnown RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms