RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 LRRC74BQ6ZQY2 392 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM126BQ8IUX1 230 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 MMAAQ8IVH4 418 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 SFTPA1Q8IWL2 248 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 FAM9CQ8IZT9 166 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DPP10Q8N608 796 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GOLM1Q8NBJ4 401 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 GLB1L3Q8NCI6 653 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 OR9I1Q8NGQ6 314 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PMEPA1Q969W9 287 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ASB9Q96DX5 294 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DUS3LQ96G46 650 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 COX14Q96I36 57 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 METTL2AQ96IZ6 378 aaKnown RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 NECTIN4Q96NY8 510 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ADAM19Q9H013 955 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DPEP2Q9H4A9 486 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ACTR8Q9H981 624 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 FBRSQ9HAH7 460 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 TRPV5Q9NQA5 729 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 DNAJC11Q9NVH1 559 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ABCD2Q9UBJ2 740 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 SNX6Q9UNH7 406 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 ITM2BQ9Y287 266 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 RNF11Q9Y3C5 154 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 BPTFQ12830 3046 aa8.07□□□□□ -1.12
ATXN3-235ENST00000556082 MUC22E2RYF6 1773 aaPredicted RBP8.07□□□□□ -1.12
ATXN3-235ENST00000556082 PDE4DIPQ5VU43 2346 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PLXNB3Q9ULL4 1909 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 MGAT4DA6NG13 374 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 OR2AG2A6NM03 316 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 ARHGEF33A8MVX0 844 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 E7ENX8 843 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CFLARO15519 480 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PEX1O43933 1283 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 MTX2O75431 263 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 RSL1D1O76021 490 aaKnown RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CAPNS1P04632 268 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 HSD17B1P14061 328 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GLB1P16278 677 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 POU3F3P20264 500 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CAPN3P20807 821 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 DRD3P35462 400 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CASP2P42575 452 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 KIR2DL1P43626 348 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GPR1P46091 355 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 ZFP36L2P47974 494 aaKnown RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GALK1P51570 392 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 POLR2JP52435 117 aaKnown RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 KCNK10P57789 538 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PFN3P60673 137 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 MS4A2Q01362 244 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 RPA4Q13156 261 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PRKG2Q13237 762 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PTCHD3Q3KNS1 767 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 VPS26BQ4G0F5 336 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 SYTL3Q4VX76 610 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 TCHHL1Q5QJ38 904 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 ZNF648Q5T619 568 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 C10orf62Q5T681 223 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 COL13A1Q5TAT6 717 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 LIPJQ5W064 366 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 NAIF1Q69YI7 327 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PNCKQ6P2M8 343 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 NEK5Q6P3R8 708 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 ZFAND4Q86XD8 727 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 FNDC5Q8NAU1 212 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 OR56A3Q8NH54 315 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PROKR1Q8TCW9 393 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CXorf40AQ8TE69 158 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 SKA2Q8WVK7 121 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 NRG4Q8WWG1 115 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 FGF14Q92915 247 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 LRRC58Q96CX6 371 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 SPDL1Q96EA4 605 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 HIC2Q96JB3 615 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 MSLNLQ96KJ4 702 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 FOPNLQ96NB1 174 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 KXD1Q9BQD3 176 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GPRC5BQ9NZH0 403 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 C6orf203Q9P0P8 240 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GULP1Q9UBP9 304 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 GIMAP2Q9UG22 337 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 LEF1Q9UJU2 399 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 EIF3LQ9Y262 564 aaKnown RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PLXNA2O75051 1894 aa8.06□□□□□ -1.12
ATXN3-235ENST00000556082 PRRC2BQ5JSZ5 2229 aaKnown RBP8.06□□□□□ -1.12
ATXN3-235ENST00000556082 CHD9Q3L8U1 2897 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 C15orf38-AP3S2A0A0A6YYH1 394 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 TMEM202A6NGA9 273 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 H3BNX3 289 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 K7EQS6 105 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 FXYD1O00168 92 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 NR5A2O00482 541 aa8.05□□□□□ -1.12
ATXN3-235ENST00000556082 CASQ2O14958 399 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 NVLO15381 856 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 POP7O75817 140 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 SORBS2O94875 1100 aaKnown RBP8.05□□□□□ -1.12
ATXN3-235ENST00000556082 C1orf105O95561 183 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms