RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 KIF5CO60282 957 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 USP1O94782 785 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 CATP04040 527 aaKnown RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 MCM3P25205 808 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 CTBP1Q13363 440 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 FASTKQ14296 549 aaKnown RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 GRM7Q14831 915 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 LONRF1Q17RB8 773 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 KLHL38Q2WGJ6 581 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 YOD1Q5VVQ6 348 aaPredicted RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 TTLL10Q6ZVT0 673 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 DENND6AQ8IWF6 608 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 PPIL6Q8IXY8 311 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 AGGF1Q8N302 714 aaeCLIP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 TTC29Q8NA56 475 aaPredicted RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 FDCSPQ8NFU4 85 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 OR2L3Q8NG85 312 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 OR2A1Q8NGT9 310 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 CALML6Q8TD86 181 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 MIB2Q96AX9 1013 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 PTERQ96BW5 349 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 ZNF285Q96NJ3 590 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 CCDC68Q9H2F9 335 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 FBXO6Q9NRD1 293 aaPredicted RBP13.24□□□□□ -0.29
PCNX4-209ENST00000555569 FAM114A2Q9NRY5 505 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 SLC22A11Q9NSA0 550 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 CUTCQ9NTM9 273 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 SNX12Q9UMY4 172 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 PLAAQ9Y263 795 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 KLK4Q9Y5K2 254 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 MAD1L1Q9Y6D9 718 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 FAM169AQ9Y6X4 670 aa13.24□□□□□ -0.29
PCNX4-209ENST00000555569 DOCK10Q96BY6 2186 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 PEX12O00623 359 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 DSCR3O14972 297 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 CTSVO60911 334 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 PSIP1O75475 530 aaKnown RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 IGHEP01854 428 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 F7P08709 466 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 ERGP11308 486 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 ITGAXP20702 1163 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 CMPK1P30085 196 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 SLC1A2P43004 574 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 CLCN7P51798 805 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 MLLT10P55197 1068 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 FOXL2P58012 376 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 VSX2P58304 361 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 NAA25Q14CX7 972 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 PPP1R7Q15435 360 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 TTLL9Q3SXZ7 439 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 NEK10Q6ZWH5 1172 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 HPS6Q86YV9 775 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 LMNTD2Q8IXW0 634 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 SMPDL3AQ92484 453 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 FKBP10Q96AY3 582 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 SIGLEC10Q96LC7 697 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 FER1L6-AS2Q96M78 137 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 SLC30A3Q99726 388 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 NUDT9Q9BW91 350 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 ENAMQ9NRM1 1142 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 C20orf96Q9NUD7 363 aaPredicted RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 TRMT1Q9NXH9 659 aaKnown RBP13.23□□□□□ -0.29
PCNX4-209ENST00000555569 GPR83Q9NYM4 423 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 KLHL42Q9P2K6 505 aa13.23□□□□□ -0.29
PCNX4-209ENST00000555569 A0A0J9YVX5 310 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 FITM1A5D6W6 292 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 MYO1CO00159 1063 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 SRPX2O60687 465 aaPredicted RBP13.22□□□□□ -0.29
PCNX4-209ENST00000555569 DPM1O60762 260 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 ONECUT2O95948 504 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 ALBP02768 609 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 UMODP07911 640 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 RPA3P35244 121 aaPredicted RBP13.22□□□□□ -0.29
PCNX4-209ENST00000555569 ARHGAP19Q14CB8 494 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 FAM214AQ32MH5 1076 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 NADK2Q4G0N4 442 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 WASHC2DQ5SRD0 308 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 RNASEH2BQ5TBB1 312 aaKnown RBP13.22□□□□□ -0.29
PCNX4-209ENST00000555569 ZNF549Q6P9A3 640 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 COX15Q7KZN9 410 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 RNF44Q7L0R7 432 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 OVCH1Q7RTY7 1134 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCNX4-209ENST00000555569 GIMAP7Q8NHV1 300 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 KCNJ9Q92806 393 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 PKP4Q99569 1192 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
PCNX4-209ENST00000555569 DPH7Q9BTV6 452 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 ACAT2Q9BWD1 397 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 KCNF1Q9H3M0 494 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 P4HTMQ9NXG6 502 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 FBXO5Q9UKT4 447 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 MED16Q9Y2X0 877 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 DHRS7Q9Y394 339 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 COMMD10Q9Y6G5 202 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 LRRK2Q5S007 2527 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
PCNX4-209ENST00000555569 CNTRLQ7Z7A1 2325 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms