RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ZSCAN9O15535 394 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 ZBTB14O43829 449 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 C1QL1O75973 258 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 FKBP9O95302 570 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 CBSLP0DN79 551 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 SAT1P21673 171 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 PTPN4P29074 926 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 CMPK1P30085 196 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 CBSP35520 551 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 PNLIPRP1P54315 467 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 POLE2P56282 527 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 PDAP1Q13442 181 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 FASTKQ14296 549 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 SLC9A5Q14940 896 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 FASTKD3Q14CZ7 662 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 ZC3H12BQ5HYM0 836 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 TEDDM1Q5T9Z0 273 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 THEMIS2Q5TEJ8 643 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 MLIPQ5VWP3 458 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 LCN10Q6JVE6 187 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 TLDC1Q6P9B6 456 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 SUSD1Q6UWL2 747 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 KIAA0408Q6ZU52 694 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 UBE2R2Q712K3 238 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 MCATQ8IVS2 390 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 MYO1HQ8N1T3 1032 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF843Q8N446 348 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 DNAJC22Q8N4W6 341 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 ENDOVQ8N8Q3 282 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 PPFIBP2Q8ND30 876 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 EEF1AKMT1Q8WVE0 214 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 APOBEC4Q8WW27 367 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 SMPDL3AQ92484 453 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 LRFN5Q96NI6 719 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 GPR87Q9BY21 358 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 CHRNA10Q9GZZ6 450 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 SAYSD1Q9NPB0 183 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 PCMTD2Q9NV79 361 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 EURLQ9NYK6 297 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 KLHL42Q9P2K6 505 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 DHCR7Q9UBM7 475 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 GPN3Q9UHW5 284 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 MAN2B2Q9Y2E5 1009 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 MED16Q9Y2X0 877 aa10.25□□□□□ -0.77
SHMT2-213ENST00000554600 UTP11Q9Y3A2 253 aaKnown RBP10.25□□□□□ -0.77
SHMT2-213ENST00000554600 A0A0J9YVX5 310 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 MYO1CO00159 1063 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 TERTO14746 1132 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 PRICKLE3O43900 615 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 URI1O94763 535 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SLC16A8O95907 504 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 AHSGP02765 367 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CTSBP07858 339 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 FURINP09958 794 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SFTPCP11686 197 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ALAS2P22557 587 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 GABRB3P28472 473 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 RORAP35398 523 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SKIV2L2P42285 1042 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 GABRA4P48169 554 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CDKN2DP55273 166 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 VSX2P58304 361 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CKAP4Q07065 602 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 MGAT5Q09328 741 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 NFATC3Q12968 1075 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 KCNAB2Q13303 367 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CYP2A13Q16696 494 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 STEAP4Q687X5 459 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 FCRL6Q6DN72 434 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 LRRC8EQ6NSJ5 796 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 PAQR3Q6TCH7 311 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ADCK2Q7Z695 626 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ZNF605Q86T29 641 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SYVN1Q86TM6 617 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CCDC25Q86WR0 208 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 CNTN4Q8IWV2 1026 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 TTC29Q8NA56 475 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 OR2L3Q8NG85 312 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 HMGCLL1Q8TB92 370 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 MCOLN3Q8TDD5 553 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 PYROXD1Q8WU10 500 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ASB11Q8WXH4 323 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SEC14L1Q92503 715 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 DLG3Q92796 817 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ZUFSPQ96AP4 578 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 ALKBH8Q96BT7 664 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 LINGO1Q96FE5 620 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 DPH2Q9BQC3 489 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SELENOSQ9BQE4 189 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 WDR83Q9BRX9 315 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 DPH7Q9BTV6 452 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 FAM117AQ9C073 453 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 RAB17Q9H0T7 212 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 MRPS30Q9NP92 439 aaKnown RBP10.24□□□□□ -0.77
SHMT2-213ENST00000554600 STARD5Q9NSY2 213 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 WHRNQ9P202 907 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 TAC3Q9UHF0 121 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 SRPK3Q9UPE1 567 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 PCDHGA6Q9Y5G7 932 aa10.24□□□□□ -0.77
SHMT2-213ENST00000554600 HEMK1Q9Y5R4 338 aaPredicted RBP10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms