RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 NUP107P57740 925 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 NFYCQ13952 458 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF829Q3KNS6 432 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PRAMEF9Q5VWM5 478 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ZDHHC20Q5W0Z9 365 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 KRTCAP2Q8N6L1 136 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 STARD8Q92502 1023 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 KLK6Q92876 244 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 FBXL8Q96CD0 374 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ACTL8Q9H568 366 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ST14Q9Y5Y6 855 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 TRPM6Q9BX84 2022 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 FAM149AA5PLN7 773 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF839A8K0R7 811 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 ARHGEF33A8MVX0 844 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SOD1P00441 154 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 POLR2JP52435 117 aaKnown RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 RPS3AP61247 264 aaKnown RBP11.37□□□□□ -0.59
SHMT2-212ENST00000554467 RUNX3Q13761 415 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 IMPG1Q17R60 797 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 MTX3Q5HYI7 312 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CYP20A1Q6UW02 462 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 GPR149Q86SP6 731 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 RGL4Q8IZJ4 473 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PCYOX1LQ8NBM8 494 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 PLA2G15Q8NCC3 412 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 DDHD1Q8NEL9 900 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 CHPT1Q8WUD6 406 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SLC12A9Q9BXP2 914 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SLC52A3Q9NQ40 469 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SACM1LQ9NTJ5 587 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 SPEGQ15772 3267 aa11.37□□□□□ -0.59
SHMT2-212ENST00000554467 EDDM13A0A1B0GTR0 161 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 PABPN1LA6NDY0 278 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CCDC154A6NI56 674 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 NUAK1O60285 661 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 VPS4BO75351 444 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SEC22BO75396 215 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TIPRLO75663 272 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 PDYNP01213 254 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 GPR1P46091 355 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 HYAL1Q12794 435 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CNTN1Q12860 1018 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 DDX39BQ13838 428 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SF1Q15637 639 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 ADNP2Q6IQ32 1131 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 KRT80Q6KB66 452 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CLVS1Q8IUQ0 354 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 YAF2Q8IY57 180 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CFAP206Q8IYR0 622 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 ADCY4Q8NFM4 1077 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 ASZ1Q8WWH4 475 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 LRRC58Q96CX6 371 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 DTD2Q96FN9 168 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TBC1D23Q9NUY8 699 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 THG1LQ9NWX6 298 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CMTM6Q9NX76 183 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 DKK3Q9UBP4 350 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CNOT6Q9ULM6 557 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SAC3D1A6NKF1 404 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 MANBAO00462 879 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 BCAS2O75934 225 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 KAT7O95251 611 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 B3GALT4O96024 378 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CBSLP0DN79 551 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CKMT2P17540 419 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CDH3P22223 829 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CBSP35520 551 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TRIM25Q14258 630 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 ELAVL3Q14576 367 aaKnown RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 FGD3Q5JSP0 725 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 C6orf10Q5SRN2 563 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CARM1Q86X55 608 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 CHPFQ8IZ52 775 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 C2orf73Q8N5S3 287 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM159Q96B96 161 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 NUS1Q96E22 293 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 PPM1MQ96MI6 270 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 C19orf43Q9BQ61 176 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TRIM54Q9BYV2 358 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SLC6A17Q9H1V8 727 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM245Q9H330 911 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 DYRK4Q9NR20 520 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 SMOXQ9NWM0 555 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 TMEM181Q9P2C4 612 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 GULP1Q9UBP9 304 aa11.36□□□□□ -0.59
SHMT2-212ENST00000554467 PRSS51A0A1B0GVH4 220 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 CLDN9O95484 217 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 MT-ND1P03886 318 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 NCK1P16333 377 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ZNF12P17014 697 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 ITGB7P26010 798 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 GRIA3P42263 894 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 C21orf59P57076 290 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 DCDC1P59894 354 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 RCAN2Q14206 197 aa11.35□□□□□ -0.59
SHMT2-212ENST00000554467 EFL1Q7Z2Z2 1120 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms