RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ELK3P41970 407 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 GABRA4P48169 554 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 LY6DQ14210 128 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 FRG1Q14331 258 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 NAA25Q14CX7 972 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 UAP1Q16222 522 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 KLHL38Q2WGJ6 581 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 LINC00303Q3SY05 128 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CCSMST1Q4G0I0 132 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 STEAP4Q687X5 459 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 LRRC8EQ6NSJ5 796 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 IGDCC3Q8IVU1 814 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 FBXO15Q8NCQ5 510 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CD200R1Q8TD46 325 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 DENND1AQ8TEH3 1009 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 INPP5DQ92835 1189 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 MR1Q95460 341 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CFAP36Q96G28 342 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 GPR21Q99679 349 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 DPH2Q9BQC3 489 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 WDR83Q9BRX9 315 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 AARSD1Q9BTE6 412 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 FAM60AQ9NP50 221 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 TSR3Q9UJK0 312 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 PLCL2Q9UPR0 1127 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 TEX264Q9Y6I9 313 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 AP1M2Q9Y6Q5 423 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 GCN1Q92616 2671 aaKnown RBP12.58□□□□□ -0.4
SHMT2-211ENST00000554310 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.4
SHMT2-211ENST00000554310 BAHCC1Q9P281 2608 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF839A8K0R7 811 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 E7ESA3 106 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 MEN1O00255 615 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 TP73O15350 636 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 ZSCAN9O15535 394 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-211ENST00000554310 PRICKLE3O43900 615 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-211ENST00000554310 KATNA1O75449 491 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 C1QL1O75973 258 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 OR2B3O76000 313 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 HAUS5O94927 633 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 PRB1P04280 392 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 SFTPCP11686 197 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 HSD17B2P37059 387 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 CAV1Q03135 178 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 CALCOCO2Q13137 446 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 ARHGAP19Q14CB8 494 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 CYP2A13Q16696 494 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 DEFB110Q30KQ9 67 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 UGT3A1Q6NUS8 523 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 DSELQ8IZU8 1212 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 DNAJC22Q8N4W6 341 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 LMNTD1Q8N9Z9 388 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 SLC38A9Q8NBW4 561 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 OR9A1PQ8NGU1 263 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 SLC30A3Q99726 388 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 SLC7A5P2Q9GIP4 190 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 ADNPQ9H2P0 1102 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 ACTL8Q9H568 366 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 PLAC1Q9HBJ0 212 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 PCMTD2Q9NV79 361 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 TRMT6Q9UJA5 497 aaKnown RBP12.57□□□□□ -0.4
SHMT2-211ENST00000554310 CORO1CQ9ULV4 474 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-211ENST00000554310 SRPK3Q9UPE1 567 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 PLAAQ9Y263 795 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 DHRS7Q9Y394 339 aa12.57□□□□□ -0.4
SHMT2-211ENST00000554310 MRPS18BQ9Y676 258 aaKnown RBP12.57□□□□□ -0.4
SHMT2-211ENST00000554310 KRT87PA6NCN2 255 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 H3BMH7 237 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF749O43361 778 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 CREG1O75629 220 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PTPN4P29074 926 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 CCR10P46092 362 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 RGS4P49798 205 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PLTPP55058 493 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 RPS15P62841 145 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 DMTNQ08495 405 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PDIA2Q13087 525 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 CBLBQ13191 982 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 SLMAPQ14BN4 828 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 SF1Q15637 639 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 ZC3H12BQ5HYM0 836 aaKnown RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PRAMEF17Q5VTA0 474 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 C16orf46Q6P387 395 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 TLDC1Q6P9B6 456 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 SYVN1Q86TM6 617 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 CPNE9Q8IYJ1 553 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 SYTL1Q8IYJ3 562 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 ZNF843Q8N446 348 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 C2orf73Q8N5S3 287 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-211ENST00000554310 OR2L3Q8NG85 312 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 FBXO25Q8TCJ0 367 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 ASB11Q8WXH4 323 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 PWWP2AQ96N64 755 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 NDNQ99608 321 aa12.56□□□□□ -0.4
SHMT2-211ENST00000554310 C17orf62Q9BQA9 187 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms