RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 OVCH1Q7RTY7 1134 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 PPP1R32Q7Z5V6 425 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SDCCAG8Q86SQ7 713 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 PRUNE1Q86TP1 453 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 LDB1Q86U70 411 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 KRT222Q8N1A0 295 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 GALNT16Q8N428 558 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 COG1Q8WTW3 980 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 TM9SF4Q92544 642 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 LPGAT1Q92604 370 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 VPS50Q96JG6 964 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FOPNLQ96NB1 174 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 BIRC8Q96P09 236 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SLC29A3Q9BZD2 475 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 ATP13A2Q9NQ11 1180 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SLAMF7Q9NQ25 335 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SLC22A11Q9NSA0 550 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 P4HTMQ9NXG6 502 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 TRMT1Q9NXH9 659 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 DHCR7Q9UBM7 475 aaKnown RBP6.34□□□□□ -1.39
SLIRP-203ENST00000554074 METRNQ9UJH8 293 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SLC39A10Q9ULF5 831 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 PYCARDQ9ULZ3 195 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 SOX13Q9UN79 622 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 VPS9D1Q9Y2B5 631 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 FAM169AQ9Y6X4 670 aa6.34□□□□□ -1.39
SLIRP-203ENST00000554074 A6NL46 340 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 VSTM2BA6NLU5 285 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 VAPBO95292 243 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 FGGP02679 453 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CTSBP07858 339 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 MLNP12872 115 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 PAMP19021 973 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 ITGAXP20702 1163 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 GNLYP22749 145 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 MGAT1P26572 445 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 HSD17B2P37059 387 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 GRIA3P42263 894 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 UQCRFS1P47985 274 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 EIF3BP55884 814 aaKnown RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 GNG11P61952 73 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 ETF1P62495 437 aaKnown RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CRADDP78560 199 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 RELAQ04206 551 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 KCNJ11Q14654 390 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 ARHGAP19Q14CB8 494 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 NKG7Q16617 165 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CYP2A13Q16696 494 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CTSL3PQ5NE16 218 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 PRMT9Q6P2P2 845 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 MYO7BQ6PIF6 2116 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 Q6ZS92 163 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 TTLL10Q6ZVT0 673 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 NEK10Q6ZWH5 1172 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 RNF44Q7L0R7 432 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 GSTA5Q7RTV2 222 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 FAM20CQ8IXL6 584 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 IQCKQ8N0W5 287 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SLC35F6Q8N357 371 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 RASGEF1CQ8N431 466 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 TTC29Q8NA56 475 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 FBXO15Q8NCQ5 510 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 OR2L3Q8NG85 312 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 OR2A1Q8NGT9 310 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CFAP61Q8NHU2 1237 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 ACTRT1Q8TDG2 376 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 MFSD3Q96ES6 412 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 IL17FQ96PD4 163 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SPSB2Q99619 263 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 BARD1Q99728 777 aaKnown RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 NAPGQ99747 312 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SELENOSQ9BQE4 189 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF552Q9H707 407 aaPredicted RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SEMA3GQ9NS98 782 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 CUTCQ9NTM9 273 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 INTS10Q9NVR2 710 aaKnown RBP6.33□□□□□ -1.4
SLIRP-203ENST00000554074 IRAK4Q9NWZ3 460 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SYBUQ9NX95 663 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 KLHL42Q9P2K6 505 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 SNX12Q9UMY4 172 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 B3GNT3Q9Y2A9 372 aa6.33□□□□□ -1.4
SLIRP-203ENST00000554074 GTF3C1Q12789 2109 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 IGLV3-12A0A075B6K2 115 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 GOLGA6L10A0A0M3HER8 536 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 FAM237BA0A1B0GVD1 139 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 A0A1W2PPV9 198 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 A0A1W2PQ72 361 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 MAGEB16A2A368 324 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 HYKKA2RU49 373 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 BLACEA4D250 179 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 OR2A25A4D2G3 310 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 ZNF839A8K0R7 811 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 TCP11X1B4DZS4 312 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 MYO1CO00159 1063 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 SOCS6O14544 535 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PCDH17O14917 1159 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 CTSVO60911 334 aa6.32□□□□□ -1.4
SLIRP-203ENST00000554074 PSIP1O75475 530 aaKnown RBP6.32□□□□□ -1.4
SLIRP-203ENST00000554074 AGFG2O95081 481 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms