RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PJA1Q8NG27 643 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MCFD2Q8NI22 146 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 PIH1D2Q8WWB5 315 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 TTC9Q92623 222 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 KCNJ9Q92806 393 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF300Q96RE9 604 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-207ENST00000553837 ALOXE3Q9BYJ1 711 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 TM6SF2Q9BZW4 377 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 AMBRA1Q9C0C7 1298 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MMP27Q9H306 513 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 AIG1Q9NVV5 245 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 NPAP1Q9NZP6 1156 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CD274Q9NZQ7 290 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 CLEC4EQ9ULY5 219 aa11.95□□□□□ -0.5
SHMT2-207ENST00000553837 MICAL3Q7RTP6 2002 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 AXIN1O15169 862 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TMCC2O75069 709 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 VPS4BO75351 444 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CRCPO75575 148 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 NPPAP01160 153 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CYBBP04839 570 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 UROSP10746 265 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CD9P21926 228 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ALDH4A1P30038 563 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 RYKP34925 604 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 HTR6P50406 440 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ST13P50502 369 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CLCN4P51793 760 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ISL1P61371 349 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 GRIK2Q13002 908 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 IL18R1Q13478 541 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 AAK1Q2M2I8 961 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 UBE2UQ5VVX9 321 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 STEAP3Q658P3 488 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TXNDC8Q6A555 127 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LAIR2Q6ISS4 152 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LETMD1Q6P1Q0 360 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 Q6ZSR9 355 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SVOPLQ8N434 492 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CDYL2Q8N8U2 506 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF566Q969W8 418 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LGALS12Q96DT0 336 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TRMT2BQ96GJ1 504 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 HBEGFQ99075 208 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 RBM4BQ9BQ04 359 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 RBM4Q9BWF3 364 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 BTBD2Q9BX70 525 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 RUBCNLQ9H714 662 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SMURF2Q9HAU4 748 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 USE1Q9NZ43 259 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 KCNN3Q9UGI6 736 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 MOSPD1Q9UJG1 213 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LEF1Q9UJU2 399 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 OSGIN1Q9UJX0 560 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF221Q9UK13 617 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 INTS6Q9UL03 887 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 USP22Q9UPT9 525 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 MAGED1Q9Y5V3 778 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 PRSS21Q9Y6M0 314 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LOC100130705A0A1B0GUX0 176 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TBX1O43435 398 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 EEDO75530 441 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 DDX5P17844 614 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ITGB6P18564 788 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 POLR2CP19387 275 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 PTGER3P43115 390 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 CLK3P49761 638 aaKnown RBP11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SEPHS1P49903 392 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 EMX2Q04743 252 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 KCNAB2Q13303 367 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 TAF12Q16514 161 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 DESI1Q6ICB0 168 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SBSNQ6UWP8 590 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 FAM151BQ6UXP7 276 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SPATA19Q7Z5L4 167 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 NATD1Q8N6N6 113 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 DNAJC5GQ8N7S2 189 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 SLAIN1Q8ND83 568 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ITFG1Q8TB96 612 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 PROX1Q92786 737 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LRRC3Q9BY71 257 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 EPS8L2Q9H6S3 715 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF304Q9HCX3 659 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 IL20Q9NYY1 176 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 DNAJB9Q9UBS3 223 aa11.94□□□□□ -0.5
SHMT2-207ENST00000553837 LAMA3Q16787 3333 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 CCDC154A6NI56 674 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 E5RI56 91 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 PGLSO95336 258 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 ESR1P03372 595 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 SOD2P04179 222 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 NAGAP17050 411 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 IL32P24001 234 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 SEMG2Q02383 582 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 RCAN2Q14206 197 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 INO80DQ53TQ3 878 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-207ENST00000553837 SYT6Q5T7P8 510 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-207ENST00000553837 ZNF691Q5VV52 312 aa11.93□□□□□ -0.5
SHMT2-207ENST00000553837 SULT1C3Q6IMI6 304 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms