RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 CCDC78A2IDD5 438 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 CCDC66A2RUB6 948 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 KLHL33A6NCF5 533 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 C3orf70A6NLC5 250 aaPredicted RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 ZNF487B1APH4 448 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 MYO1FO00160 1098 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 PEX12O00623 359 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SOCS6O14544 535 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 BUD23O43709 281 aaKnown RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 PMPCBO75439 489 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 PROSCO94903 275 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 PRAMEF1O95521 474 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 PTPN3P26045 913 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 AKT1P31749 480 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SSR1P43307 286 aaKnown RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 PRLHRP49683 370 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 AP1B1Q10567 949 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 AIMP2Q13155 320 aaKnown RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 PPP2R5EQ16537 467 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 CYP2A13Q16696 494 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 LONRF2Q1L5Z9 754 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SIRPB2Q5JXA9 342 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 MLIPQ5VWP3 458 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 ZDHHC20Q5W0Z9 365 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SPESP1Q6UW49 350 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 NPNTQ6UXI9 565 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 GLT6D1Q7Z4J2 308 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 TRIM73Q86UV7 250 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 MAP7D3Q8IWC1 876 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 ADGRF3Q8IZF5 1079 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 KCTD6Q8NC69 237 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 LRRN4CLQ8ND94 238 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 FAM13CQ8NE31 585 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 OR52E1Q8NGJ3 308 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 FLVCR1-AS1Q8TAF5 88 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 HM13Q8TCT9 377 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 LCN9Q8WX39 176 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 PTERQ96BW5 349 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SLC7A5P2Q9GIP4 190 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 OR52A5Q9H2C5 316 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 SRMSQ9H3Y6 488 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 TFB2MQ9H5Q4 396 aaKnown RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 ACTR10Q9NZ32 417 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 UBP1Q9NZI7 540 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7□□□□□ -1.29
ATXN3-219ENST00000553488 DHCR7Q9UBM7 475 aaKnown RBP7□□□□□ -1.29
ATXN3-219ENST00000553488 SERTAD3Q9UJW9 196 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 FBXL4Q9UKA2 621 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 HEY1Q9Y5J3 304 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 AP1M2Q9Y6Q5 423 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 HEATR5BQ9P2D3 2071 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 AKAP6Q13023 2319 aa7□□□□□ -1.29
ATXN3-219ENST00000553488 INTS1Q8N201 2190 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FBN3Q75N90 2809 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 A0A087X0T9 212 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 AGAP14A8MT82 685 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 C2orf74A8MZ97 194 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 PCDH17O14917 1159 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 ZSCAN9O15535 394 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 OR2B3O76000 313 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FAM228BP0C875 321 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 PYGMP11217 842 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 MSH3P20585 1137 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 MMP11P24347 488 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 KDELR1P24390 212 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 WNT3AP56704 352 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 KCNK10P57789 538 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 DCDP81605 110 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 TMPRSS15P98073 1019 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 Q0VFX4 171 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 WASHC5Q12768 1159 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 CDC16Q13042 620 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 BOP1Q14137 746 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 PTPRCAPQ14761 206 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 PDK1Q15118 436 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 PRKD1Q15139 912 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 SLC1A5Q15758 541 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 STX1AQ16623 288 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 NKAIN1Q4KMZ8 207 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 TEX44Q53QW1 395 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FCRL6Q6DN72 434 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 RPUSD3Q6P087 351 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FAM180AQ6UWF9 173 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 SPNS3Q6ZMD2 512 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 COX15Q7KZN9 410 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 VSIG1Q86XK7 387 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 GPR135Q8IZ08 494 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 NXPE1Q8N323 547 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 DNAJB14Q8TBM8 379 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 BLOC1S5Q8TDH9 187 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 SREK1Q8WXA9 508 aaKnown RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 FKBP10Q96AY3 582 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 NACC2Q96BF6 587 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 CCDC120Q96HB5 630 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 OXNAD1Q96HP4 312 aaPredicted RBP6.99□□□□□ -1.29
ATXN3-219ENST00000553488 CNDP1Q96KN2 507 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 TEKT5Q96M29 485 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 OR2A14Q96R47 310 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 TAAR6Q96RI8 345 aa6.99□□□□□ -1.29
ATXN3-219ENST00000553488 AP1M1Q9BXS5 423 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms