RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CDH15P55291 814 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GABARAPL2P60520 117 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ERVK-21P61565 698 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 PPP2R2BQ00005 443 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 HSPA14Q0VDF9 509 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 MTAPQ13126 283 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GPM6BQ13491 265 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 DCTN2Q13561 401 aaKnown RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 PTCHD3Q3KNS1 767 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ZC3H12BQ5HYM0 836 aaKnown RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 OTUD3Q5T2D3 398 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TMEM214Q6NUQ4 689 aaKnown RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ERICH5Q6P6B1 374 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ZNF773Q6PK81 442 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 THAP5Q7Z6K1 395 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 STK32CQ86UX6 486 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 HIPK1Q86Z02 1210 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 CROCCP3Q8IVE0 287 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ZNF555Q8NEP9 628 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 OR5K1Q8NHB7 308 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 RNF217Q8TC41 542 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 LZICQ8WZA0 190 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 HDAC2Q92769 488 aaKnown RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TMIGD2Q96BF3 282 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ISOC1Q96CN7 298 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 NRBF2Q96F24 287 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 MAGED4Q96JG8 741 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SAMD11Q96NU1 681 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ZSCAN5AQ9BUG6 496 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SLC46A2Q9BY10 475 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ING2Q9H160 280 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ZDHHC6Q9H6R6 413 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 IFT80Q9P2H3 777 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TBC1D14Q9P2M4 693 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 B4GALT6Q9UBX8 382 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SAMD4AQ9UPU9 718 aaKnown RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TRIM64BA6NI03 449 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 EVPLLA8MZ36 301 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GNGT2O14610 69 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SEC24DO94855 1032 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SLCO2B1O94956 709 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 CCNDBP1O95273 360 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 UGT2B4P06133 528 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GSTM1P09488 218 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 VIPR1P32241 457 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 CTSOP43234 321 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GZMMP51124 257 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 EPHA5P54756 1037 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 GSTM4Q03013 218 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 LRRC74AQ0VAA2 488 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 LRIT3Q3SXY7 679 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 C10orf62Q5T681 223 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-205ENST00000553474 PLPP4Q5VZY2 271 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TBPL2Q6SJ96 375 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 ARHGAP22Q7Z5H3 698 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 TRAM1L1Q8N609 369 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 KRTCAP2Q8N6L1 136 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 DDHD1Q8NEL9 900 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 POF1BQ8WVV4 589 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 OTUB2Q96DC9 234 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 SPATA9Q9BWV2 254 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 FAM83DQ9H4H8 585 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 CXorf21Q9HAI6 301 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 IRAK3Q9Y616 596 aa12.56□□□□□ -0.4
SHMT2-205ENST00000553474 EPOPA6NHQ4 379 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 A8MX80 341 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 C5orf67F2Z3F1 127 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 RFXAPO00287 272 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 SOX1O00570 391 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-205ENST00000553474 CDK4P11802 303 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 AMD1P17707 334 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 SDC1P18827 310 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 NNMTP40261 264 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 HNF4AP41235 474 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 MAGEA2P43356 314 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 KIR3DL1P43629 444 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 RAD23AP54725 363 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 PON2Q15165 354 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 ARHGAP15Q53QZ3 475 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 SGO1Q5FBB7 561 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 BROXQ5VW32 411 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 MBOAT1Q6ZNC8 495 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 GCNT7Q6ZNI0 430 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 KIAA0907Q7Z7F0 614 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-205ENST00000553474 CLVS1Q8IUQ0 354 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-205ENST00000553474 KREMEN2Q8NCW0 462 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 FBXO30Q8TB52 745 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 SKA2Q8WVK7 121 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-205ENST00000553474 NELL1Q92832 810 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 PYURFQ96I23 114 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 MUS81Q96NY9 551 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 VPS35Q96QK1 796 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 TCF25Q9BQ70 676 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 BRF2Q9HAW0 419 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 TLR9Q9NR96 1032 aa12.55□□□□□ -0.4
SHMT2-205ENST00000553474 FAM120CQ9NX05 1096 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms