RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 MYL6BP14649 208 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 POLR2CP19387 275 aaPredicted RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 CYP2A7P20853 494 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 RPA1P27694 616 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF131P52739 623 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 EEF1A2Q05639 463 aaKnown RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 SLC20A2Q08357 652 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF415Q09FC8 603 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 RASGEF1BQ0VAM2 473 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 KIR2DS5Q14953 304 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 TAF7Q15545 349 aaPredicted RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ELFN2Q5R3F8 820 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 C12orf60Q5U649 245 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 LRRC38Q5VT99 294 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 MFSD7Q6UXD7 560 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 UNC5DQ6UXZ4 953 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 PLEKHM3Q6ZWE6 761 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 BTN2A1Q7KYR7 527 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 SATL1Q86VE3 508 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ODF3L1Q8IXM7 274 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 CRYBG2Q8N1P7 616 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 CLIP4Q8N3C7 705 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 NANOGP1Q8N7R0 232 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 NEK11Q8NG66 645 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM216AQ8WUB2 273 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 CCDC107Q8WV48 283 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 PRCCQ92733 491 aaPredicted RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 WBP2Q969T9 261 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ALG14Q96F25 216 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 CDKN2AIPNLQ96HQ2 116 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM71F1Q96KD3 344 aaPredicted RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 C16orf45Q96MC5 204 aaPredicted RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM20AQ96MK3 541 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF559Q9BR84 538 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 TSPYL1Q9H0U9 437 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 SNX25Q9H3E2 840 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 GKN1Q9NS71 199 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 SMARCAL1Q9NZC9 954 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF224Q9NZL3 707 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 SIX4Q9UIU6 781 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 KCNK6Q9Y257 313 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 DLGAP4Q9Y2H0 992 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 TMED3Q9Y3Q3 217 aa3.8□□□□□ -1.8
LSM6P2-201ENST00000552208 WDR33Q9C0J8 1336 aaKnown RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 A0A087X0K7 114 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 LINC01553A4QN01 128 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 KPNA7A9QM74 516 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 NDC80O14777 642 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 SYF2O95926 243 aaKnown RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 LIPFP07098 398 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 SBK2P0C263 348 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 HLA-DOBP13765 273 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ITGA2P17301 1181 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ACP1P24666 158 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 PIK3R1P27986 724 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 NKX2-1P43699 371 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 THOP1P52888 689 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 CX3CL1P78423 397 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 DSC1Q08554 894 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GTF2H2Q13888 395 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 STXBP2Q15833 593 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 INAQ16352 499 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 IFI44LQ53G44 452 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 PHLDA2Q53GA4 152 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 XKR9Q5GH70 373 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 NDUFAF5Q5TEU4 345 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GTF2H2CQ6P1K8 395 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ARMC9Q7Z3E5 817 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ASPGQ86U10 573 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GGNQ86UU5 652 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 AMIGO1Q86WK6 493 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GPALPP1Q8IXQ4 340 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 RYBPQ8N488 228 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 SMRP1Q8NCR6 262 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ANKRD20A12PQ8NF67 263 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 RDM1Q8NG50 284 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 EXOC6Q8TAG9 804 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 OLIG1Q8TAK6 271 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 PIGBQ92521 554 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 DTD2Q96FN9 168 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF560Q96MR9 790 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 NAP1L3Q99457 506 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF577Q9BSK1 485 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 CDK19Q9BWU1 502 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 NYXQ9GZU5 481 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 KCNMB3Q9NPA1 279 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 PHPT1Q9NRX4 125 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 GPR173Q9NS66 373 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 SPASTQ9UBP0 616 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 SH3BGRL2Q9UJC5 107 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 FOXA2Q9Y261 457 aaPredicted RBP3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 CLCA3PQ9Y6N3 262 aa3.79□□□□□ -1.8
LSM6P2-201ENST00000552208 ZNF804BA4D1E1 1349 aa3.78□□□□□ -1.8
LSM6P2-201ENST00000552208 FAM149AA5PLN7 773 aa3.78□□□□□ -1.8
LSM6P2-201ENST00000552208 SRRM3A6NNA2 597 aaPredicted RBP3.78□□□□□ -1.8
LSM6P2-201ENST00000552208 TMEM150CB9EJG8 249 aa3.78□□□□□ -1.8
LSM6P2-201ENST00000552208 F8VVB4 439 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms