RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, human

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHMP1A-210	ENST00000551981	ZNF808	Q8N4W9	903 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	C2orf73	Q8N5S3	287 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CFAP61	Q8NHU2	1237 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	STT3B	Q8TCJ2	826 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ASZ1	Q8WWH4	475 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZUFSP	Q96AP4	578 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MIEF2	Q96C03	454 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF285	Q96NJ3	590 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FAM118B	Q9BPY3	351 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RAB11FIP5	Q9BXF6	653 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF282	Q9UDV7	671 aa	Predicted RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	C3orf18	Q9UK00	162 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SLC39A10	Q9ULF5	831 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MRPS2	Q9Y399	296 aa	Known RBP	13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MAU2	Q9Y6X3	613 aa		13.56	□□□□□ -0.24
CHMP1A-210	ENST00000551981	HIVEP1	P15822	2718 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	HYKK	A2RU49	373 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCDC162P	A2VCL2	907 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MROH6	A6NGR9	719 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OR51F1	A6NGY5	319 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCL21	O00585	134 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RASGRF2	O14827	1237 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PSMD3	O43242	534 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TJP3	O95049	919 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CRYAB	P02511	175 aa	Known RBP	13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SERPINA7	P05543	415 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	APOA4	P06727	396 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZGLP1	P0C6A0	271 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CXCR2	P25025	360 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PSMA3	P25788	255 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	HTR1E	P28566	365 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FOXN2	P32314	431 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CTNNA1	P35221	906 aa	Known RBP	13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SOX11	P35716	441 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	P3H1	Q32P28	736 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	VWA2	Q5GFL6	755 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	WASHC2D	Q5SRD0	308 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CNST	Q6PJW8	725 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MRGPRG	Q86SM5	289 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PRSS58	Q8IYP2	241 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RAB42	Q8N4Z0	105 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	HAS2	Q92819	552 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCDC120	Q96HB5	630 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	LURAP1	Q96LR2	239 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	IL17F	Q96PD4	163 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TAAR6	Q96RI8	345 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MENT	Q9BUN1	341 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PLA2G3	Q9NZ20	509 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PTGFRN	Q9P2B2	879 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CIDEB	Q9UHD4	219 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PCDHA3	Q9Y5H8	950 aa		13.55	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZFHX3	Q15911	3703 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	OR1I1	O60431	355 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	WFS1	O76024	890 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	UNC5C	O95185	931 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GAS8	O95995	478 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PTMA	P06454	111 aa	Known RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PRR35	P0CG20	571 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MYBL2	P10244	700 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	FBL	P22087	321 aa	Known RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCR7	P32248	378 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PPARG	P37231	505 aa	Predicted RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CASP6	P55212	293 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	AP2B1	P63010	937 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RBPJ	Q06330	500 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GRB7	Q14451	532 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	TMED2	Q15363	201 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ZNF630	Q2M218	657 aa	Predicted RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ATG9B	Q674R7	924 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	AFTPH	Q6ULP2	937 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	LINC00523	Q86TU6	105 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	LMNTD1	Q8N9Z9	388 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	DNAJB8	Q8NHS0	232 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SUN3	Q8TAQ9	357 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GSDMB	Q8TAX9	411 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	BRIX1	Q8TDN6	353 aa	Known RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	C8orf44	Q96CB5	159 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PIH1D1	Q9NWS0	290 aa	Known RBP	13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ABI3	Q9P2A4	366 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SEC14L3	Q9UDX4	400 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MRFAP1	Q9Y605	127 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CPAMD8	Q8IZJ3	1885 aa		13.54	□□□□□ -0.24
CHMP1A-210	ENST00000551981	AKR1B15	C9JRZ8	316 aa	Predicted RBP	13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	PRPF4	O43172	522 aa	Known RBP eCLIP	13.53	□□□□□ -0.24	5e-7	■■■■□ 23.9
CHMP1A-210	ENST00000551981	CTSV	O60911	334 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	GPC4	O75487	556 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RASAL1	O95294	804 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	BMP10	O95393	424 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	METTL18	O95568	372 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	EIF2S1	P05198	315 aa	Known RBP	13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	SNRPB2	P08579	225 aa	Known RBP	13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	ERVK-10	P10266	1014 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	COX6A1	P12074	109 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CA7	P43166	264 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	RWDD2B	P57060	319 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	NAA25	Q14CX7	972 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	MUM1	Q2TAK8	710 aa		13.53	□□□□□ -0.24
CHMP1A-210	ENST00000551981	CCDC38	Q502W7	563 aa		13.53	□□□□□ -0.24

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