RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 TLR4O00206 839 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 RSL1D1O76021 490 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 JUNP05412 331 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TDGF1P13385 188 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 EPORP19235 508 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 NCF2P19878 526 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 ITPKAP23677 461 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 PRDX3P30048 256 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 HOXD12P35452 270 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 FOXA1P55317 472 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 ERVK-8P63133 956 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 EIF2B5Q13144 721 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 CHIT1Q13231 466 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 CCSMST1Q4G0I0 132 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 XKR6Q5GH73 641 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TPRG1LQ5T0D9 272 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 THEMIS2Q5TEJ8 643 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 FRG2Q64ET8 278 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 IL27RAQ6UWB1 636 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 RD3Q7Z3Z2 195 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TSACCQ96A04 125 aaPredicted RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 PYCR2Q96C36 320 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 FRG2BQ96QU4 278 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 KCNA7Q96RP8 456 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 MENTQ9BUN1 341 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 CCDC106Q9BWC9 280 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TMEM168Q9H0V1 697 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 BRF2Q9HAW0 419 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TM9SF3Q9HD45 589 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 INTS7Q9NVH2 962 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 NMRK1Q9NWW6 199 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 ASIC5Q9NY37 505 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TAGLN3Q9UI15 199 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 PPT2Q9UMR5 302 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 WDR37Q9Y2I8 494 aa13.77□□□□□ -0.21
LETMD1-229ENST00000551261 TDRKHQ9Y2W6 561 aaKnown RBP13.77□□□□□ -0.21
LETMD1-229ENST00000551261 DOCK9Q9BZ29 2069 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 KCNE1BA0A087WTH5 132 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 CFAP73A6NFT4 308 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 TMEM221A6NGB7 291 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 M0R296 226 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 MANBAO00462 879 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 GNSP15586 552 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 XRCC1P18887 633 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 MAPK1P28482 360 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 PXNP49023 591 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 HNRNPH2P55795 449 aaKnown RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 NXPH1P58417 271 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 HNRNPKP61978 463 aaKnown RBP eCLIP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 IMPG1Q17R60 797 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 ZXDCQ2QGD7 858 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 ZNF528Q3MIS6 628 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 C17orf64Q86WR6 236 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 MYLK4Q86YV6 388 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 C1orf210Q8IVY1 113 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 TRIM48Q8IWZ4 208 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 KRT78Q8N1N4 520 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 C1orf216Q8TAB5 229 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 GAB3Q8WWW8 586 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 NSL1Q96IY1 281 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 CDK15Q96Q40 435 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 TUBB1Q9H4B7 451 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 AKTIPQ9H8T0 292 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 ERVMER34-1Q9H9K5 563 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 PRDM8Q9NQV8 689 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 NDE1Q9NXR1 346 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 SPASTQ9UBP0 616 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 TBC1D29Q9UFV1 150 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 ZNF490Q9ULM2 529 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-229ENST00000551261 RNF11Q9Y3C5 154 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 PCDHB11Q9Y5F2 797 aa13.76□□□□□ -0.21
LETMD1-229ENST00000551261 A0A1B0GTL3 188 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 DYTNA2CJ06 578 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 E7EQ34 232 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 BCAT2O15382 392 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-229ENST00000551261 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 THRAP10827 490 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 ESRRAP11474 423 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-229ENST00000551261 NPPBP16860 134 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 JUNDP17535 347 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 C21orf59P57076 290 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 EMX2Q04743 252 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 DOC2AQ14183 400 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 CLCA4Q14CN2 919 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 NR6A1Q15406 480 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 GLIPR1L2Q4G1C9 344 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 LYSMD4Q5XG99 296 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 PMS2CLQ68D20 193 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 MED27Q6P2C8 311 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 IYDQ6PHW0 289 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 SLC30A9Q6PML9 568 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 SLCO4C1Q6ZQN7 724 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 SLC9B2Q86UD5 537 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 NRROSQ86YC3 692 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 TBC1D19Q8N5T2 526 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 FRMD1Q8N878 549 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 ABHD11Q8NFV4 315 aa13.75□□□□□ -0.21
LETMD1-229ENST00000551261 TTLQ8NG68 377 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms