RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 HBQ1P09105 142 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 PAMP19021 973 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SNRPNP63162 240 aaKnown RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 DHX9Q08211 1270 aaKnown RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SF1Q15637 639 aaKnown RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 LONRF1Q17RB8 773 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 NKAIN1Q4KMZ8 207 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 TLDC1Q6P9B6 456 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 RNF44Q7L0R7 432 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 LRRC56Q8IYG6 542 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 OR9A1PQ8NGU1 263 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 PROKR1Q8TCW9 393 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 GRK7Q8WTQ7 553 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SEC14L1Q92503 715 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 DLG3Q92796 817 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SLC22A18Q96BI1 424 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 PKP4Q99569 1192 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 GPR21Q99679 349 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 RAB11FIP5Q9BXF6 653 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 ING2Q9H160 280 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SPATA7Q9P0W8 599 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 ANAPC2Q9UJX6 822 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 SRPK3Q9UPE1 567 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 DHRS7Q9Y394 339 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 MAD1L1Q9Y6D9 718 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 CNTRLQ7Z7A1 2325 aa12.49□□□□□ -0.41
NPAS3-209ENST00000551008 PRRC2CQ9Y520 2896 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 RP1L1Q8IWN7 2480 aaPredicted RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 FITM1A5D6W6 292 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 TCP1P17987 556 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 CHRM3P20309 590 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 CCNFP41002 786 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 CSRP3P50461 194 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 PGGT1BP53609 377 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 IGFBP7Q16270 282 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 HSP90AA5PQ58FG0 334 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 RBM20Q5T481 1227 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 SUSD1Q6UWL2 747 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 ASB18Q6ZVZ8 466 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 NEK10Q6ZWH5 1172 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 PIWIL4Q7Z3Z4 852 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 PPP1R32Q7Z5V6 425 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 MRGPREQ86SM8 312 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 SKA2Q8WVK7 121 aaPredicted RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 ASB11Q8WXH4 323 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 KCNJ9Q92806 393 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 TRIM51Q9BSJ1 452 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 AARSD1Q9BTE6 412 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 DHRS4Q9BTZ2 278 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 NUDT9Q9BW91 350 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 KLHL42Q9P2K6 505 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 ASIC3Q9UHC3 531 aa12.48□□□□□ -0.41
NPAS3-209ENST00000551008 PCDHGA9Q9Y5G4 932 aaKnown RBP12.48□□□□□ -0.41
NPAS3-209ENST00000551008 GOLGA6L10A0A0M3HER8 536 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CTAGE9A4FU28 777 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 TARM1B6A8C7 271 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 C9J4A7 227 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 GFYI3L273 518 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 MAP3K7O43318 606 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 FKBP9O95302 570 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 SLC16A8O95907 504 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 ERVK-10P10266 1014 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 PGAM1P18669 254 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CCL11P51671 97 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 FOXK1P85037 733 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 KLRB1Q12918 225 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 THOC5Q13769 683 aaKnown RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 PPP1R7Q15435 360 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 MLIPQ5VWP3 458 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 ZNF425Q6IV72 752 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 FBXO42Q6P3S6 717 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 KCNMB4Q86W47 210 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CNTN4Q8IWV2 1026 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CPNE9Q8IYJ1 553 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 FBXO15Q8NCQ5 510 aaPredicted RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 C2CD4AQ8NCU7 369 aaPredicted RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 PPFIBP2Q8ND30 876 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 FDCSPQ8NFU4 85 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 ZNF480Q8WV37 535 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 N4BP2L2Q92802 583 aaPredicted RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CAPZA3Q96KX2 299 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 C10orf90Q96M02 699 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 NDNQ99608 321 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 SPSB2Q99619 263 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 EBNA1BP2Q99848 306 aaKnown RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 ACAT2Q9BWD1 397 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 SLC7A5P2Q9GIP4 190 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CLMPQ9H6B4 373 aa12.47□□□□□ -0.41
NPAS3-209ENST00000551008 IARS2Q9NSE4 1012 aaKnown RBP12.47□□□□□ -0.41
NPAS3-209ENST00000551008 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms