RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 EURLQ9NYK6 297 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 GRHL1Q9NZI5 618 aa16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 GCN1Q92616 2671 aaKnown RBP16.57■□□□□ 0.24
CHMP1A-208ENST00000550102 A0A1W2PPV9 198 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 C9J4A7 227 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 H3BMH7 237 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 GFYI3L273 518 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 EIF3HO15372 352 aaKnown RBP eCLIP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 CREG1O75629 220 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 C1QL1O75973 258 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 SLC16A8O95907 504 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 SYF2O95926 243 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 PTPN4P29074 926 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 CMPK1P30085 196 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 RPA3P35244 121 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 CCR10P46092 362 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 PNLIPRP1P54315 467 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 SP140Q13342 867 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 PTCHD3Q3KNS1 767 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 ZC3H12BQ5HYM0 836 aaKnown RBP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 FCRL6Q6DN72 434 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 TLDC1Q6P9B6 456 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM198BQ6UWH4 519 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 UBE2R2Q712K3 238 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 MYO1HQ8N1T3 1032 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 GPATCH11Q8N954 259 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 OR2A1Q8NGT9 310 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 PKP4Q99569 1192 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 AKIRIN1Q9H9L7 192 aaPredicted RBP16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 TXLNGQ9NUQ3 528 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 CDC23Q9UJX2 597 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 KLK4Q9Y5K2 254 aa16.56■□□□□ 0.24
CHMP1A-208ENST00000550102 CCDC88CQ9P219 2028 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 NUP210LQ5VU65 1888 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 TARM1B6A8C7 271 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ZBTB14O43829 449 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 CCNDBP1O95273 360 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 RECKO95980 971 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 C8GP07360 202 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 RAB40ALP0C0E4 278 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SFTPCP11686 197 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 AGXTP21549 392 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 GRIA3P42263 894 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 RPS18P62269 152 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 TIAL1Q01085 375 aaKnown RBP eCLIP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 CAV1Q03135 178 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 C19orf57Q0VDD7 668 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 PDAP1Q13442 181 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 TSTA3Q13630 321 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ERV3-1Q14264 604 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 FASTKQ14296 549 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 DEFB109BQ30KR1 87 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM45BPQ6NSW5 357 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 RHBDD2Q6NTF9 364 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SYVN1Q86TM6 617 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SLC26A11Q86WA9 606 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 MCATQ8IVS2 390 aaKnown RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SPNS2Q8IVW8 549 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF655Q8N720 491 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 FAM45AQ8TCE6 357 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 PROKR1Q8TCW9 393 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 PYROXD1Q8WU10 500 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 DLG3Q92796 817 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ZUFSPQ96AP4 578 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 LINGO1Q96FE5 620 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 RUFY1Q96T51 708 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 C17orf62Q9BQA9 187 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SELENOSQ9BQE4 189 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 NDC1Q9BTX1 674 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ACAT2Q9BWD1 397 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SEMA4CQ9C0C4 833 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SPRTNQ9H040 489 aaPredicted RBP16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 ADNPQ9H2P0 1102 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 SAYSD1Q9NPB0 183 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 NSMCE4AQ9NXX6 385 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 POLHQ9Y253 713 aa16.55■□□□□ 0.24
CHMP1A-208ENST00000550102 CDC14CA4D256 554 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 URI1O94763 535 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 FDXRP22570 491 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 POLE2P56282 527 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 COL9A2Q14055 689 aaPredicted RBP16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 NCF4Q15080 339 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 WHAMMP3Q1A5X7 153 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 HECTD2Q5U5R9 776 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 C8orf74Q6P047 294 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 PAQR3Q6TCH7 311 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 SUSD1Q6UWL2 747 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 CYHR1Q6ZMK1 362 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 CAPN12Q6ZSI9 719 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF843Q8N446 348 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 ENDOVQ8N8Q3 282 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 EXD3Q8N9H8 876 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 ZNF480Q8WV37 535 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 EEF1AKMT1Q8WVE0 214 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 APOBEC4Q8WW27 367 aaKnown RBP16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 NLNQ9BYT8 704 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 PHACTR1Q9C0D0 580 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 SLC6A20Q9NP91 592 aa16.54■□□□□ 0.24
CHMP1A-208ENST00000550102 MOCS1Q9NZB8 636 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms