RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.33□□□□□ -0.6
LETMD1-221ENST00000550100 KCNJ9Q92806 393 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 CERS2Q96G23 380 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 GBP5Q96PP8 586 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 GPR87Q9BY21 358 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 FANCEQ9HB96 536 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 KLHL42Q9P2K6 505 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 KCND3Q9UK17 655 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 IKZF3Q9UKT9 509 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 PLCL2Q9UPR0 1127 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 MDC1Q14676 2089 aaKnown RBP11.33□□□□□ -0.6
LETMD1-221ENST00000550100 RELNP78509 3460 aa11.33□□□□□ -0.6
LETMD1-221ENST00000550100 CCDC188H7C350 402 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 MASP2O00187 686 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 KLF7O75840 302 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TSPAN12O95859 305 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SLC16A8O95907 504 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PDGFAP04085 211 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PAFAH1B1P43034 410 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ETF1P62495 437 aaKnown RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CHAF1BQ13112 559 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SLC9A5Q14940 896 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 UGT8Q16880 541 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TMEM207Q6UWW9 146 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 MBOAT1Q6ZNC8 495 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 NEK10Q6ZWH5 1172 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PTRH1Q86Y79 214 aaKnown RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZNF480Q8WV37 535 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 APOBEC4Q8WW27 367 aaKnown RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ABHD17AQ96GS6 310 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SNF8Q96H20 258 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZNF285Q96NJ3 590 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CATSPER2Q96P56 530 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 OLFM1Q99784 485 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 FAM167BQ9BTA0 163 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 NLNQ9BYT8 704 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 DPH5Q9H2P9 285 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZNF71Q9NQZ8 489 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SMYD2Q9NRG4 433 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZC3H7BQ9UGR2 993 aaKnown RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TCFL5Q9UL49 500 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 KLK4Q9Y5K2 254 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 EFCAB8A8MWE9 144 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 E7ENX8 843 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 E7ESA3 106 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PFDN6O15212 129 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZSCAN9O15535 394 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TTC4O95801 387 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 RECKO95980 971 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 RAB40ALP0C0E4 278 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 MPC1LP0DKB6 136 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CASQ1P31415 396 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CCNFP41002 786 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 MC1RQ01726 317 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TAP2Q03519 686 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PDIA2Q13087 525 aaKnown RBP11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CBLBQ13191 982 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 HIF1AQ16665 826 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 DUPD1Q68J44 220 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 RHBDD2Q6NTF9 364 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TTC23LQ6PF05 361 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 COX15Q7KZN9 410 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 ZNF605Q86T29 641 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 LMNTD2Q8IXW0 634 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SHISA5Q8N114 240 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 PDIK1LQ8N165 341 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CALML6Q8TD86 181 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 FOPNLQ96NB1 174 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 DPH7Q9BTV6 452 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SLC25A18Q9H1K4 315 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 MOCS1Q9NZB8 636 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SPATA7Q9P0W8 599 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 RNF14Q9UBS8 474 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 TLK1Q9UKI8 766 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 SH2B3Q9UQQ2 575 aa11.32□□□□□ -0.6
LETMD1-221ENST00000550100 CXorf49A8MYA2 514 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 MAP3K7O43318 606 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 KDM1AO60341 852 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 ZIC2O95409 532 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 SKIV2L2P42285 1042 aaKnown RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 PNLIPRP1P54315 467 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 VSX2P58304 361 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 RPS15P62841 145 aaKnown RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 NCF4Q15080 339 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 PHKG1Q16816 387 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 HECTD2Q5U5R9 776 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 MLIPQ5VWP3 458 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 SYVN1Q86TM6 617 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 GPR135Q8IZ08 494 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 FBXO15Q8NCQ5 510 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 FBXO36Q8NEA4 188 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 N4BP2L2Q92802 583 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-221ENST00000550100 ZUFSPQ96AP4 578 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 SLC22A18Q96BI1 424 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 RUNDC3BQ96NL0 473 aa11.31□□□□□ -0.6
LETMD1-221ENST00000550100 MESP1Q9BRJ9 268 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms